Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   N2A94_RS00005 Genome accession   NZ_CP104048
Coordinates   237..1010 (-) Length   257 a.a.
NCBI ID   WP_045407580.1    Uniprot ID   -
Organism   Streptococcus parauberis strain KSP20     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1..6010
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N2A94_RS00005 (N2A94_00005) spo0J 237..1010 (-) 774 WP_045407580.1 ParB/RepB/Spo0J family partition protein Regulator
  N2A94_RS00010 (N2A94_00010) htrA 1086..2294 (-) 1209 WP_003108843.1 S1C family serine protease Regulator
  N2A94_RS00015 (N2A94_00015) rlmH 2498..2977 (+) 480 WP_013794545.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29261.88 Da        Isoelectric Point: 10.1648

>NTDB_id=727328 N2A94_RS00005 WP_045407580.1 237..1010(-) (spo0J) [Streptococcus parauberis strain KSP20]
MTEHLKTIPIADIVANPYQPRLSFDTKELMELAHSIKMNGLIQPIIVRKSDIFGYELIAGERRLRASQLAGLTTIPAVIK
DISNKDSMHQAIVENLQRSNLNPIEEAKAFQNILEKEEMTHDELAQYMGKSRPYISNSLRLLQLPKSIKEAIEKHHISSG
HARALLAVTSKKEQENYFKQIISQNLSVRQTENLVKKKTNKKLSKIEKDIFNQAIENELAKSLGLPIQLHKKNDGTGHIK
LTFSNTEELNRIINKLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=727328 N2A94_RS00005 WP_045407580.1 237..1010(-) (spo0J) [Streptococcus parauberis strain KSP20]
ATGACTGAACATTTAAAAACAATTCCAATTGCTGATATTGTAGCTAATCCTTATCAACCTCGTTTAAGTTTTGATACTAA
AGAATTAATGGAATTGGCTCATTCTATTAAAATGAATGGCTTAATACAACCTATTATAGTAAGAAAATCGGATATCTTTG
GTTATGAGTTAATAGCAGGTGAAAGAAGACTGAGAGCTTCACAATTAGCTGGTCTAACTACCATTCCCGCAGTTATCAAA
GATATTTCAAATAAAGATAGTATGCATCAAGCGATTGTTGAAAATTTACAACGGTCTAATTTGAATCCAATTGAAGAAGC
AAAAGCTTTTCAAAATATACTTGAAAAAGAGGAAATGACCCATGATGAACTAGCGCAGTATATGGGCAAATCTCGTCCGT
ATATTAGTAATAGTCTAAGGCTGCTACAATTACCAAAATCAATTAAGGAAGCCATTGAAAAACATCACATTTCCTCAGGG
CATGCGCGTGCTTTATTAGCTGTAACCAGTAAAAAAGAGCAAGAAAATTATTTTAAACAAATTATTAGTCAGAATTTGAG
TGTTCGACAAACTGAAAATTTAGTAAAAAAGAAAACAAATAAAAAACTAAGTAAAATAGAAAAAGACATTTTTAATCAAG
CTATTGAAAATGAGTTAGCAAAAAGCCTTGGTTTACCAATCCAATTACATAAAAAAAACGATGGAACTGGTCACATCAAA
TTAACTTTTTCAAATACTGAAGAATTAAACAGAATTATCAACAAGCTAAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-95)

HTH domain found in ParB protein (HTH_ParB)

(147-197)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.594

99.611

0.584