Detailed information NTG0727318

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: N2A96_RS09230
• Genome accession: NZ_CP104047
• Coordinates: 1822850..1823785 (-)
• Length: 311 a.a.
• NCBI ID: WP_037622068.1
• Uniprot ID: -
• Organism: Streptococcus parauberis strain KSP10
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1817850..1828785

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N2A96_RS09200 (N2A96_09200)	-	1817913..1818332 (+)	420	WP_003107711.1	Panacea domain-containing protein	-
N2A96_RS09205 (N2A96_09205)	-	1818332..1819306 (+)	975	WP_003107712.1	hypothetical protein	-
N2A96_RS09210 (N2A96_09210)	rimI	1819484..1819900 (-)	417	WP_003105855.1	ribosomal protein S18-alanine N-acetyltransferase	-
N2A96_RS09215 (N2A96_09215)	tsaB	1819905..1820597 (-)	693	WP_311201944.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
N2A96_RS09220 (N2A96_09220)	-	1820870..1821100 (+)	231	WP_003102975.1	DNA-dependent RNA polymerase subunit epsilon	-
N2A96_RS09225 (N2A96_09225)	rnjA	1821102..1822784 (+)	1683	WP_260003343.1	ribonuclease J1	-
N2A96_RS09230 (N2A96_09230)	amiF	1822850..1823785 (-)	936	WP_037622068.1	ABC transporter ATP-binding protein	Regulator
N2A96_RS09235 (N2A96_09235)	oppD	1823785..1824828 (-)	1044	WP_003103717.1	ABC transporter ATP-binding protein	Regulator
N2A96_RS09240 (N2A96_09240)	-	1824843..1825874 (-)	1032	WP_003107717.1	ABC transporter permease	-
N2A96_RS09245 (N2A96_09245)	-	1825884..1826798 (-)	915	WP_003103193.1	ABC transporter permease	-
N2A96_RS09250 (N2A96_09250)	-	1826874..1828532 (-)	1659	WP_003107719.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 35178.13 Da
• Isoelectric Point: 6.5131

>NTDB_id=727318 N2A96_RS09230 WP_037622068.1 1822850..1823785(-) (amiF) [Streptococcus parauberis strain KSP10]
MTEERKKLVELKNVSLTFNKGKSNEVKAINNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYEITDGEIIFNGVNITKL
KGKELHNFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTKTKEEREARVQELLDRVGLSKDHVTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQTERGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSED
VYNNPIHPYTRSLLSAIPEPDPDYERQRVAEIYDPSIELDGKEREMREITPGHFVFSTEEEAVAYKANSNK

Nucleotide

• Length: 936 bp

>NTDB_id=727318 N2A96_RS09230 WP_037622068.1 1822850..1823785(-) (amiF) [Streptococcus parauberis strain KSP10]
ATGACTGAAGAACGTAAAAAATTAGTTGAACTAAAAAACGTTTCTTTAACCTTTAATAAAGGGAAAAGCAACGAAGTCAA
GGCCATTAATAATGTCAGTTTTGATATCTATGAAGGTGAAGTCTTTGGATTAGTTGGGGAATCAGGTTCTGGTAAAACAA
CAGTTGGCCGTGCTATCTTAAAACTTTATGAAATTACCGATGGCGAAATTATTTTCAATGGTGTAAATATCACTAAACTA
AAAGGAAAAGAACTTCATAATTTCCGTAAAGATGCACAAATGATTTTCCAAGATCCACAAGCAAGTCTTAATGGACGGAT
GAAAATTAGAGACATCGTTGCTGAAGGACTAGACATTCATGGTTTAACTAAAACAAAGGAAGAACGTGAAGCTCGTGTTC
AAGAACTACTTGACCGTGTTGGTTTGAGTAAAGACCATGTGACTCGTTATCCACATGAATTTTCAGGAGGACAACGTCAA
CGTATTGGTATTGCCCGTGCCTTGGCTGTAAAACCCAAATTTATCATTGCTGATGAACCAATTTCTGCTTTGGACGTATC
TATCCAAGCACAGGTTGTTAACTTGATGCAAAAATTACAAACTGAACGTGGTTTAACCTACTTGTTTATCGCCCATGATT
TATCAATGGTTAAATACATTTCAGATCGTATTGGTGTTATGCACTGGGGTAAAATGTTAGAAATTGGGACATCTGAAGAT
GTTTATAATAACCCAATTCACCCATATACAAGAAGTCTCTTATCAGCTATTCCTGAACCAGACCCAGATTATGAACGCCA
ACGTGTTGCGGAAATTTATGATCCAAGTATTGAATTGGATGGAAAAGAACGTGAAATGCGTGAAATCACACCAGGTCACT
TCGTATTTTCAACAGAAGAAGAAGCAGTAGCTTACAAAGCAAATTCAAATAAATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-265)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.221	99.035	0.537
amiF	Streptococcus thermophilus LMG 18311	53.896	99.035	0.534
amiF	Streptococcus salivarius strain HSISS4	53.247	99.035	0.527