Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | GDK21_RS08100 | Genome accession | NZ_AP019542 |
| Coordinates | 1650004..1650303 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844410.1 | Uniprot ID | A0A7R6NZL1 |
| Organism | Staphylococcus aureus strain KG-03 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1645004..1655303
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GDK21_RS08075 (SAKG03_15130) | gcvPA | 1646216..1647562 (-) | 1347 | WP_000019691.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| GDK21_RS08080 (SAKG03_15140) | gcvT | 1647582..1648673 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| GDK21_RS08085 (SAKG03_15150) | - | 1648832..1649356 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| GDK21_RS08090 (SAKG03_15160) | - | 1649346..1649492 (-) | 147 | WP_001792109.1 | hypothetical protein | - |
| GDK21_RS08095 (SAKG03_15170) | comGF | 1649589..1650086 (-) | 498 | WP_001788897.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| GDK21_RS08100 (SAKG03_15180) | comGE | 1650004..1650303 (-) | 300 | WP_000844410.1 | hypothetical protein | Machinery gene |
| GDK21_RS08105 (SAKG03_15190) | comGD | 1650290..1650736 (-) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| GDK21_RS08110 (SAKG03_15200) | comGC | 1650714..1651025 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| GDK21_RS08115 (SAKG03_15210) | comGB | 1651039..1652109 (-) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| GDK21_RS08120 (SAKG03_15220) | comGA | 1652081..1653055 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| GDK21_RS08125 (SAKG03_15230) | - | 1653107..1653730 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| GDK21_RS08130 (SAKG03_15240) | - | 1653727..1654056 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| GDK21_RS08135 (SAKG03_15250) | - | 1654056..1655042 (-) | 987 | WP_000161311.1 | ROK family glucokinase | - |
| GDK21_RS08140 (SAKG03_15260) | - | 1655039..1655242 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11079.18 Da Isoelectric Point: 9.9215
>NTDB_id=72729 GDK21_RS08100 WP_000844410.1 1650004..1650303(-) (comGE) [Staphylococcus aureus strain KG-03]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQSIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQSIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=72729 GDK21_RS08100 WP_000844410.1 1650004..1650303(-) (comGE) [Staphylococcus aureus strain KG-03]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAATCAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAATCAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus N315 |
100 |
100 |
1 |
| comGE | Staphylococcus aureus MW2 |
85.965 |
100 |
0.99 |