Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   P1X13_RS03705 Genome accession   NZ_CP119678
Coordinates   741174..741650 (+) Length   158 a.a.
NCBI ID   WP_010922230.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 1004     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 736174..746650
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P1X13_RS03680 (P1X13_03680) - 736213..737001 (+) 789 WP_002984887.1 Nif3-like dinuclear metal center hexameric protein -
  P1X13_RS03685 (P1X13_03685) - 737041..738150 (+) 1110 WP_136273900.1 FAD-binding oxidoreductase -
  P1X13_RS03690 (P1X13_03690) rfbA 738208..739077 (+) 870 WP_014407521.1 glucose-1-phosphate thymidylyltransferase RfbA -
  P1X13_RS03695 (P1X13_03695) - 739077..739700 (+) 624 WP_136083470.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  P1X13_RS03700 (P1X13_03700) rfbB 739913..740953 (+) 1041 WP_002984881.1 dTDP-glucose 4,6-dehydratase -
  P1X13_RS03705 (P1X13_03705) mutX 741174..741650 (+) 477 WP_010922230.1 8-oxo-dGTP diphosphatase Machinery gene
  P1X13_RS03710 (P1X13_03710) - 741708..742889 (+) 1182 WP_002990002.1 AI-2E family transporter -
  P1X13_RS03715 (P1X13_03715) - 742879..744126 (+) 1248 WP_159330866.1 tetratricopeptide repeat protein -
  P1X13_RS03720 (P1X13_03720) fbp54 744185..745837 (-) 1653 WP_010922232.1 Rqc2 family fibronectin-binding protein Fbp54 -

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 18452.64 Da        Isoelectric Point: 4.3268

>NTDB_id=727264 P1X13_RS03705 WP_010922230.1 741174..741650(+) (mutX) [Streptococcus pyogenes strain 1004]
MTQLATICYIDNGDSLLLLHRNKKENDVHKGKWISVGGKLEAGETPDECARREILEETHLTVTEMAFKGIITFPEFTPGH
DWYTYVFKVTGFEGDLISDEESREGTLEWVPYDQVLEKPTWEGDYDIFKWILEDRSFFSAKFTYDQNNQLMDKSVTFY

Nucleotide


Download         Length: 477 bp        

>NTDB_id=727264 P1X13_RS03705 WP_010922230.1 741174..741650(+) (mutX) [Streptococcus pyogenes strain 1004]
ATGACTCAATTAGCAACCATTTGTTACATTGATAATGGCGATTCTTTGCTATTATTACACCGCAATAAAAAAGAAAATGA
TGTCCACAAAGGCAAGTGGATTTCAGTTGGGGGTAAGCTCGAGGCTGGTGAGACCCCAGATGAGTGTGCCCGTCGTGAGA
TTTTAGAGGAAACCCATTTGACTGTTACAGAGATGGCCTTTAAAGGAATCATTACTTTTCCAGAATTTACCCCTGGTCAT
GACTGGTATACCTATGTTTTTAAAGTAACAGGATTTGAAGGAGACCTCATTTCAGATGAAGAGTCACGAGAAGGAACCTT
GGAATGGGTACCTTACGATCAAGTGTTGGAAAAGCCAACTTGGGAAGGTGATTATGACATTTTTAAATGGATTTTAGAAG
ACCGTTCTTTTTTCTCTGCCAAATTTACCTATGACCAAAACAACCAACTCATGGATAAATCTGTGACCTTTTATTGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

69.62

100

0.696