Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   N2A93_RS07440 Genome accession   NZ_CP104046
Coordinates   1459252..1460289 (-) Length   345 a.a.
NCBI ID   WP_003106043.1    Uniprot ID   A0A0E2UF26
Organism   Streptococcus parauberis strain KSP14     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1454252..1465289
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N2A93_RS07415 (N2A93_07415) rbsC 1454302..1455252 (-) 951 WP_003107329.1 ribose ABC transporter permease -
  N2A93_RS07420 (N2A93_07420) - 1455254..1456732 (-) 1479 WP_003102471.1 sugar ABC transporter ATP-binding protein -
  N2A93_RS07425 (N2A93_07425) rbsD 1456744..1457142 (-) 399 WP_003102489.1 D-ribose pyranase -
  N2A93_RS07430 (N2A93_07430) rbsK 1457117..1458028 (-) 912 WP_003107330.1 ribokinase -
  N2A93_RS07435 (N2A93_07435) - 1458030..1459004 (-) 975 WP_003107331.1 LacI family DNA-binding transcriptional regulator -
  N2A93_RS07440 (N2A93_07440) sepM 1459252..1460289 (-) 1038 WP_003106043.1 SepM family pheromone-processing serine protease Regulator
  N2A93_RS07445 (N2A93_07445) coaD 1460276..1460767 (-) 492 WP_003103109.1 pantetheine-phosphate adenylyltransferase -
  N2A93_RS07450 (N2A93_07450) rsmD 1460757..1461296 (-) 540 WP_003107333.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  N2A93_RS07455 (N2A93_07455) asnA 1461383..1462375 (-) 993 WP_003105278.1 aspartate--ammonia ligase -
  N2A93_RS07460 (N2A93_07460) arcC 1462543..1463493 (-) 951 WP_003103897.1 carbamate kinase -
  N2A93_RS07465 (N2A93_07465) - 1463517..1464848 (-) 1332 WP_003107334.1 dipeptidase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37520.30 Da        Isoelectric Point: 9.9732

>NTDB_id=727259 N2A93_RS07440 WP_003106043.1 1459252..1460289(-) (sepM) [Streptococcus parauberis strain KSP14]
MKKNNKLKIWLLGIIAVIAIGFSLFYPLPYYIEMPGGAYDIRSVLKVNEQKDKEKGSYNFVAVSISHATFAQILYAWATP
FTEISSAEATTGGYSDADYMRINQFYMETSQNGAVYQALKKAGKPVSLDYLGVYVLDVSKNSSLKGVLNIADTVTSVNQK
HFKSSADLIKFVSAMKLGDKVSVQYTSNGKDKSANGKIIKLKNGKNGIGISLTDHTKVHTKEKIDFTTEGVGGPSAGLMF
TLDILDQINKEDLRKGRNIAGTGTIDQEGKVGDIGGAGLKVVAAAKEGAEIFFVPNNPVDPRVKKVDPKAITNYKEALEA
AKQLKTKMKIVPVKTVDDAISYLKK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=727259 N2A93_RS07440 WP_003106043.1 1459252..1460289(-) (sepM) [Streptococcus parauberis strain KSP14]
ATGAAGAAAAATAATAAATTAAAAATCTGGTTATTGGGCATTATTGCTGTCATTGCAATTGGTTTTTCACTATTTTATCC
TCTACCTTATTATATTGAAATGCCTGGTGGTGCCTATGATATCCGTAGTGTCCTTAAGGTAAATGAACAAAAAGACAAGG
AAAAAGGGTCTTATAATTTTGTTGCTGTAAGTATTAGTCATGCGACATTTGCACAAATTCTCTATGCTTGGGCAACACCA
TTTACAGAGATTTCATCAGCAGAAGCAACTACTGGTGGCTATAGTGATGCAGACTACATGAGAATTAATCAATTCTATAT
GGAAACTTCACAAAATGGTGCTGTTTATCAAGCTCTCAAAAAAGCTGGTAAACCTGTTTCCCTTGACTACTTAGGTGTTT
ATGTTCTTGATGTCAGTAAGAATTCTTCTCTTAAAGGGGTTTTGAATATTGCTGATACAGTTACAAGTGTTAATCAAAAA
CACTTTAAGAGTTCAGCTGATTTGATTAAGTTTGTGTCTGCCATGAAGTTGGGGGATAAAGTCAGTGTCCAATATACCAG
TAATGGTAAAGATAAATCAGCCAATGGTAAAATTATTAAGTTGAAAAATGGTAAAAATGGGATTGGAATCAGCTTAACTG
ACCATACCAAAGTACACACTAAAGAAAAAATTGATTTTACAACTGAAGGCGTTGGTGGTCCAAGTGCTGGTTTGATGTTC
ACCCTTGATATTCTTGACCAAATCAATAAAGAAGATTTACGTAAGGGGCGTAATATTGCTGGTACTGGTACAATTGACCA
AGAAGGTAAAGTTGGTGATATTGGTGGTGCAGGCTTAAAAGTAGTTGCAGCTGCTAAAGAAGGGGCAGAGATTTTCTTCG
TTCCTAATAATCCAGTTGATCCGCGTGTCAAAAAAGTTGATCCAAAAGCAATAACTAATTATAAAGAAGCCTTAGAAGCT
GCTAAGCAATTAAAAACAAAAATGAAGATTGTTCCAGTCAAGACAGTCGATGACGCAATCAGTTATCTGAAAAAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0E2UF26

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

68.986

100

0.69