Detailed information    

insolico Bioinformatically predicted

Overview


Name   irvR   Type   Regulator
Locus tag   P1J77_RS08710 Genome accession   NZ_CP119597
Coordinates   1781296..1782063 (-) Length   255 a.a.
NCBI ID   WP_003058809.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 1039     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1776296..1787063
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P1J77_RS08695 (P1J77_08695) hexB 1776754..1778736 (-) 1983 WP_159330786.1 DNA mismatch repair endonuclease MutL Machinery gene
  P1J77_RS08700 (P1J77_08700) - 1778831..1779976 (-) 1146 WP_002992191.1 site-specific integrase -
  P1J77_RS08705 (P1J77_08705) - 1780304..1780447 (+) 144 WP_002992192.1 putative holin-like toxin -
  P1J77_RS08710 (P1J77_08710) irvR 1781296..1782063 (-) 768 WP_003058809.1 S24 family peptidase Regulator
  P1J77_RS08715 (P1J77_08715) - 1782217..1782423 (+) 207 WP_002992503.1 helix-turn-helix transcriptional regulator -
  P1J77_RS08720 (P1J77_08720) - 1782457..1782630 (+) 174 Protein_1662 helix-turn-helix transcriptional regulator -
  P1J77_RS08725 (P1J77_08725) - 1782678..1783085 (+) 408 WP_002992501.1 hypothetical protein -
  P1J77_RS08730 (P1J77_08730) - 1783098..1783220 (+) 123 WP_002992500.1 hypothetical protein -
  P1J77_RS08735 (P1J77_08735) - 1783503..1784024 (+) 522 WP_002992498.1 Rha family transcriptional regulator -
  P1J77_RS08740 (P1J77_08740) - 1784269..1784601 (+) 333 WP_002992497.1 hypothetical protein -
  P1J77_RS08745 (P1J77_08745) - 1784598..1784819 (+) 222 WP_010922763.1 hypothetical protein -
  P1J77_RS08750 (P1J77_08750) - 1784822..1785013 (+) 192 WP_010922764.1 hypothetical protein -
  P1J77_RS08755 (P1J77_08755) - 1785025..1785354 (+) 330 WP_003058810.1 hypothetical protein -
  P1J77_RS08760 (P1J77_08760) - 1785357..1785629 (+) 273 WP_001100459.1 hypothetical protein -
  P1J77_RS08765 (P1J77_08765) - 1785630..1786487 (+) 858 WP_136098354.1 primase alpha helix C-terminal domain-containing protein -

Sequence


Protein


Download         Length: 255 a.a.        Molecular weight: 28725.00 Da        Isoelectric Point: 4.3544

>NTDB_id=727031 P1J77_RS08710 WP_003058809.1 1781296..1782063(-) (irvR) [Streptococcus pyogenes strain 1039]
MAKNSPQDLINREIFSTNLNMLMAKKNIKQIDIHNKLGIPKSTITGYVKGRSLPTAGNVQKLADFFGVLKSDIDPRFDSN
NIETNSNIIPSTLQKVTSTLSQLEHKRQLNVLDYAETQLEQQNTVEEPQATYYTYNYYDHAASAGTGQYLNDVQVETIEL
PVDYDADFVIPVYGDSMEPEYHSGDYVFIKLSINLSDGDIGVFEYYGDAYIKQLVINDSGAFLHSLNDKYDDILIDRDSD
FRIIGEVIGSFTSKS

Nucleotide


Download         Length: 768 bp        

>NTDB_id=727031 P1J77_RS08710 WP_003058809.1 1781296..1782063(-) (irvR) [Streptococcus pyogenes strain 1039]
ATGGCTAAAAATAGTCCCCAAGATTTAATAAATAGAGAAATTTTCTCAACAAATCTCAACATGCTTATGGCTAAAAAGAA
TATCAAACAGATAGATATTCACAACAAACTAGGAATACCTAAGAGTACGATAACTGGCTATGTTAAAGGTCGTTCACTCC
CAACTGCTGGAAACGTTCAAAAGCTGGCGGACTTCTTCGGAGTTCTAAAATCAGACATTGACCCCCGTTTTGATTCTAAT
AATATTGAAACAAATAGTAATATTATCCCATCAACCCTACAAAAAGTAACATCTACTTTATCTCAGCTAGAACACAAGCG
ACAATTAAACGTCCTTGATTATGCTGAAACACAATTAGAACAACAAAACACAGTAGAAGAACCACAAGCCACCTACTACA
CTTACAATTACTACGACCACGCAGCTTCAGCTGGTACAGGTCAGTATCTAAATGATGTACAAGTAGAAACAATTGAATTA
CCAGTCGATTACGACGCTGATTTTGTCATACCGGTTTATGGCGATTCTATGGAACCCGAATACCATTCTGGGGACTATGT
ATTTATCAAACTATCTATTAACCTGTCAGATGGTGATATAGGAGTTTTTGAGTATTACGGTGATGCTTATATCAAACAAC
TTGTTATAAACGATTCTGGAGCATTTCTGCATAGTCTGAACGACAAGTATGACGATATACTCATAGATAGAGATAGTGAT
TTCCGTATTATCGGAGAAGTTATTGGGAGTTTTACATCTAAATCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  irvR Streptococcus mutans UA159

34

100

0.4