Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   P1J77_RS07650 Genome accession   NZ_CP119597
Coordinates   1564815..1565570 (-) Length   251 a.a.
NCBI ID   WP_002986719.1    Uniprot ID   A2RBY9
Organism   Streptococcus pyogenes strain 1039     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1559815..1570570
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P1J77_RS07635 (P1J77_07635) purC 1562615..1563319 (-) 705 WP_015055882.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -
  P1J77_RS07640 (P1J77_07640) - 1563470..1563712 (-) 243 WP_014407187.1 phosphopantetheine-binding protein -
  P1J77_RS07645 (P1J77_07645) plsX 1563705..1564712 (-) 1008 WP_002987696.1 phosphate acyltransferase PlsX -
  P1J77_RS07650 (P1J77_07650) recO 1564815..1565570 (-) 756 WP_002986719.1 DNA repair protein RecO Machinery gene
  P1J77_RS07655 (P1J77_07655) - 1565756..1566718 (-) 963 WP_002986722.1 ribose-phosphate diphosphokinase -
  P1J77_RS07660 (P1J77_07660) - 1566971..1568167 (-) 1197 WP_010921769.1 CHAP domain-containing protein -

Sequence

Protein


Download         Length: 251 a.a.        Molecular weight: 29516.97 Da        Isoelectric Point: 6.9077

>NTDB_id=727019 P1J77_RS07650 WP_002986719.1 1564815..1565570(-) (recO) [Streptococcus pyogenes strain 1039]
MQLTESLGIVLFNRNYREDDKLVKIFTEVAGKQMFFVKHISRSKMSSIIQPLTIADFIFKLNDTGLSYVVDYSNVNTYRY
INNDIFRLAYASYVLALADAAIADNESDSHLFTFLKKTLDLMEEGLDYEILTNIFEIQILDRFGISLNFHECAICHRTDL
PLDFSHRFSAVLCSEHYYKDNRRNHLDPNVIYLLSRFQKITFDDLRTISLNKDIKKKLRQFIDELYHDYVGIKLKSKTFI
DNLVKWGDIMK

Nucleotide


Download         Length: 756 bp        

>NTDB_id=727019 P1J77_RS07650 WP_002986719.1 1564815..1565570(-) (recO) [Streptococcus pyogenes strain 1039]
ATGCAACTAACAGAATCACTAGGCATCGTTCTTTTTAATAGGAATTATCGAGAAGATGATAAATTAGTCAAAATATTTAC
TGAAGTAGCAGGTAAGCAGATGTTTTTCGTGAAACATATTAGTCGTTCCAAAATGTCCTCAATCATTCAACCACTAACGA
TTGCTGATTTTATTTTCAAGTTAAATGATACAGGCTTGTCTTATGTTGTTGACTATAGTAACGTTAACACTTATCGGTAT
ATTAATAATGATATTTTTCGATTAGCCTATGCTAGTTATGTCTTAGCATTAGCTGATGCTGCGATTGCAGATAATGAATC
AGATTCGCATTTGTTTACGTTTTTGAAAAAAACACTTGATTTGATGGAAGAGGGCCTAGATTATGAAATTTTGACAAATA
TTTTTGAAATTCAGATATTAGATCGTTTTGGTATTAGTCTAAACTTTCATGAGTGTGCCATTTGTCATCGCACTGATTTA
CCGCTTGATTTTTCCCATCGTTTTTCAGCTGTACTTTGTTCTGAACATTATTACAAAGACAACCGACGTAATCATTTAGA
TCCAAATGTTATCTACTTGTTGAGTCGATTTCAAAAAATCACATTTGATGATTTGAGAACTATTTCATTGAATAAAGACA
TCAAAAAGAAGCTTCGTCAGTTCATTGATGAGTTGTATCACGACTATGTAGGAATCAAATTAAAAAGTAAAACATTCATT
GATAATTTAGTTAAGTGGGGAGATATTATGAAATGA

Domains

Predicted by InterProScan.

Recombination protein O C terminal (RecO_C)

(83-237)

Recombination protein O N terminal (RecO_N)

(1-73)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A2RBY9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

60.159

100

0.602