Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   N0B18_RS06360 Genome accession   NZ_CP103995
Coordinates   1227194..1227385 (+) Length   63 a.a.
NCBI ID   WP_046380930.1    Uniprot ID   A0AA96V089
Organism   Bacillus subtilis strain SRCM117109     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1222194..1232385
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N0B18_RS06335 (N0B18_06335) yjzC 1224102..1224281 (+) 180 WP_003245356.1 YjzC family protein -
  N0B18_RS06340 (N0B18_06340) yjzD 1224328..1224513 (-) 186 WP_003245236.1 YjzD family protein -
  N0B18_RS06345 (N0B18_06345) - 1224762..1225496 (+) 735 WP_014479433.1 hypothetical protein -
  N0B18_RS06350 (N0B18_06350) - 1225578..1226135 (+) 558 WP_014479435.1 hypothetical protein -
  N0B18_RS06355 (N0B18_06355) med 1226226..1227179 (+) 954 WP_069837427.1 transcriptional regulator Med Regulator
  N0B18_RS06360 (N0B18_06360) comZ 1227194..1227385 (+) 192 WP_046380930.1 ComG operon transcriptional repressor ComZ Regulator
  N0B18_RS06365 (N0B18_06365) yjzB 1227415..1227654 (-) 240 WP_003232972.1 spore coat protein YjzB -
  N0B18_RS06370 (N0B18_06370) fabH 1227819..1228757 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  N0B18_RS06375 (N0B18_06375) fabF 1228780..1230021 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  N0B18_RS06380 (N0B18_06380) yjaZ 1230097..1230882 (+) 786 WP_014479439.1 DUF2268 domain-containing protein -
  N0B18_RS06385 (N0B18_06385) appD 1231074..1232060 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7282.31 Da        Isoelectric Point: 4.2564

>NTDB_id=726821 N0B18_RS06360 WP_046380930.1 1227194..1227385(+) (comZ) [Bacillus subtilis strain SRCM117109]
MQHEKSLEFLQIAMKYFPEAKEQFEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=726821 N0B18_RS06360 WP_046380930.1 1227194..1227385(+) (comZ) [Bacillus subtilis strain SRCM117109]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATTTCCCTGAAGCGAAAGAACAGTTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

96.825

100

0.968