Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   N0B18_RS04700 Genome accession   NZ_CP103995
Coordinates   922653..923447 (+) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM117109     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 917653..928447
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N0B18_RS04670 (N0B18_04670) sxzA 918492..919523 (+) 1032 WP_003233568.1 iron chelate uptake ABC transporter family permease subunit -
  N0B18_RS04675 (N0B18_04675) yfhB 919638..920519 (+) 882 WP_014479213.1 PhzF family phenazine biosynthesis isomerase -
  N0B18_RS04680 (N0B18_04680) yfhC 920607..921191 (+) 585 WP_032723010.1 nitroreductase -
  N0B18_RS04685 (N0B18_04685) yfhD 921230..921421 (-) 192 WP_003233561.1 YfhD family protein -
  N0B18_RS04690 (N0B18_04690) yfhE 921488..921598 (-) 111 WP_003223230.1 YfhE family protein -
  N0B18_RS04695 (N0B18_04695) yfhF 921653..922564 (-) 912 WP_014479216.1 TIGR01777 family oxidoreductase -
  N0B18_RS04700 (N0B18_04700) recX 922653..923447 (+) 795 WP_014479217.1 recombination regulator RecX Regulator
  N0B18_RS04705 (N0B18_04705) yfhH 923449..923763 (+) 315 WP_003244592.1 YfhH family protein -
  N0B18_RS04710 (N0B18_04710) yfhI 923906..925099 (+) 1194 WP_080478396.1 MFS transporter -
  N0B18_RS04715 (N0B18_04715) sspK 925131..925283 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  N0B18_RS04720 (N0B18_04720) yfhJ 925408..925677 (+) 270 WP_003243789.1 YfhJ family protein -
  N0B18_RS04725 (N0B18_04725) - 925788..926937 (+) 1150 Protein_882 IS3 family transposase -
  N0B18_RS04730 (N0B18_04730) yfhK 927111..927629 (+) 519 WP_069964064.1 SH3 domain-containing protein -
  N0B18_RS04735 (N0B18_04735) spdL 927714..928046 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=726813 N0B18_RS04700 WP_014479217.1 922653..923447(+) (recX) [Bacillus subtilis strain SRCM117109]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=726813 N0B18_RS04700 WP_014479217.1 922653..923447(+) (recX) [Bacillus subtilis strain SRCM117109]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992