Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   N0B18_RS02000 Genome accession   NZ_CP103995
Coordinates   386943..387083 (+) Length   46 a.a.
NCBI ID   WP_225910706.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM117109     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 381943..392083
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N0B18_RS01995 (N0B18_01995) srfAB 383876..386851 (+) 2976 Protein_350 surfactin non-ribosomal peptide synthetase SrfAB -
  N0B18_RS02000 (N0B18_02000) comS 386943..387083 (+) 141 WP_225910706.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5260.11 Da        Isoelectric Point: 8.7633

>NTDB_id=726808 N0B18_RS02000 WP_225910706.1 386943..387083(+) (comS) [Bacillus subtilis strain SRCM117109]
MNRSGKHLISCIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=726808 N0B18_RS02000 WP_225910706.1 386943..387083(+) (comS) [Bacillus subtilis strain SRCM117109]
TTGAACCGATCAGGCAAGCATCTTATCAGCTGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978