Detailed information NTG0072669

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: FGKAn22_RS02575
• Genome accession: NZ_AP019536
• Coordinates: 543142..544101 (-)
• Length: 319 a.a.
• NCBI ID: WP_212786426.1
• Uniprot ID: A0AAN1T002
• Organism: Ferrigenium kumadai strain An22
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 538142..549101

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGKAn22_RS02545 (FGKAn22_05010)	-	538757..539482 (+)	726	WP_212786421.1	cytochrome c1	-
FGKAn22_RS02550 (FGKAn22_05020)	-	539604..540200 (+)	597	WP_212786422.1	glutathione S-transferase N-terminal domain-containing protein	-
FGKAn22_RS02555 (FGKAn22_05030)	-	540200..540589 (+)	390	WP_212786423.1	ClpXP protease specificity-enhancing factor	-
FGKAn22_RS02560 (FGKAn22_05040)	rpoH	540637..541497 (-)	861	WP_212786424.1	RNA polymerase sigma factor RpoH	-
FGKAn22_RS02565 (FGKAn22_05050)	ftsX	541566..542471 (-)	906	WP_343214993.1	permease-like cell division protein FtsX	-
FGKAn22_RS02570 (FGKAn22_05060)	ftsE	542468..543145 (-)	678	WP_212786425.1	cell division ATP-binding protein FtsE	-
FGKAn22_RS02575 (FGKAn22_05070)	pilA	543142..544101 (-)	960	WP_212786426.1	signal recognition particle-docking protein FtsY	Machinery gene
FGKAn22_RS02580 (FGKAn22_05080)	-	544175..545530 (+)	1356	WP_212786427.1	pitrilysin family protein	-
FGKAn22_RS02585 (FGKAn22_05090)	-	545520..546836 (+)	1317	WP_212786428.1	pitrilysin family protein	-
FGKAn22_RS02590 (FGKAn22_05100)	rsmD	546863..547375 (+)	513	WP_246487441.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
FGKAn22_RS02595 (FGKAn22_05110)	coaD	547368..547838 (+)	471	WP_212786429.1	pantetheine-phosphate adenylyltransferase	-
FGKAn22_RS02600 (FGKAn22_05120)	-	547865..548119 (+)	255	WP_212786430.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 34030.31 Da
• Isoelectric Point: 6.3578

>NTDB_id=72669 FGKAn22_RS02575 WP_212786426.1 543142..544101(-) (pilA) [Ferrigenium kumadai strain An22]
MFSFLKKNSSATAEAKPDGGWIARLKSGLARTGNQITDLFSRGGKIDEDLYEELETILITADVGMTATNALLADLRHLVR
ERRLSEAEQLKEALAECLLKLLKPLAQPLQADTHKPYVIMMCGVNGAGKTTSIGKLAKYLQGQGLSVLLAAGDTFRAAAR
EQLMTWGERNNVTVIAQQSGDAAAVIYDAVQAAQARKIDVVLADTAGRLTTQAHLMEEIKKVKRVIAKALPEAPHEVLLV
LDANTGQNALSQVKAFDEALGVTGLILTKLDGTAKGGVIAAIAKAHPIPVRFIGVGEGLDDLRPFDAEDFVTALLGLEA

Nucleotide

• Length: 960 bp

>NTDB_id=72669 FGKAn22_RS02575 WP_212786426.1 543142..544101(-) (pilA) [Ferrigenium kumadai strain An22]
ATGTTTAGTTTCCTGAAAAAGAATTCATCCGCAACCGCCGAAGCCAAGCCTGACGGCGGCTGGATCGCGCGCCTCAAGTC
CGGCCTGGCGCGCACCGGCAACCAGATCACCGACCTGTTCAGCCGCGGCGGCAAGATCGACGAAGACCTGTACGAGGAAC
TGGAGACCATCCTCATCACCGCCGACGTGGGCATGACCGCGACCAACGCGCTGCTCGCCGACCTGCGCCACCTCGTGCGC
GAACGCCGCCTGAGCGAGGCCGAGCAACTCAAGGAAGCGCTCGCCGAATGCCTGCTCAAGCTGCTCAAGCCTCTGGCACA
GCCGCTGCAGGCCGACACCCACAAACCCTACGTAATCATGATGTGCGGCGTCAACGGCGCAGGCAAAACCACTTCCATCG
GCAAACTGGCCAAATACCTGCAGGGACAGGGCCTGTCGGTGCTGCTCGCGGCGGGCGACACCTTCCGCGCGGCGGCGCGC
GAACAGCTGATGACCTGGGGCGAACGCAACAACGTCACGGTGATCGCGCAGCAAAGCGGAGACGCCGCGGCGGTGATCTA
CGACGCGGTGCAGGCCGCGCAGGCGCGCAAGATCGACGTGGTGCTGGCCGACACCGCCGGACGCCTGACCACGCAGGCTC
ACCTGATGGAAGAGATCAAGAAGGTGAAGCGCGTGATCGCCAAGGCGCTGCCCGAGGCGCCGCACGAGGTGCTGCTGGTG
CTGGACGCGAACACCGGGCAGAACGCGCTCTCCCAGGTCAAGGCATTCGACGAGGCGCTCGGCGTGACCGGCCTGATCCT
GACCAAGCTGGACGGCACCGCCAAGGGCGGCGTCATCGCGGCGATCGCCAAGGCGCACCCGATACCCGTGCGATTCATCG
GTGTGGGCGAGGGACTGGACGACCTGCGCCCATTCGACGCCGAAGACTTCGTCACCGCCTTGCTGGGGCTGGAGGCGTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (33-97)

• SRP54-type protein, GTPase domain (SRP54) (117-316)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	66.667	94.044	0.627