Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   P1I87_RS04610 Genome accession   NZ_CP119576
Coordinates   854925..855365 (+) Length   146 a.a.
NCBI ID   WP_000431168.1    Uniprot ID   R4Z9I5
Organism   Streptococcus agalactiae strain Guangzhou-SAG092     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 849925..860365
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P1I87_RS04590 (P1I87_04590) - 850041..850550 (-) 510 WP_000870956.1 DUF308 domain-containing protein -
  P1I87_RS04595 (P1I87_04595) gdhA 850718..852067 (+) 1350 WP_000200435.1 NADP-specific glutamate dehydrogenase -
  P1I87_RS04600 (P1I87_04600) - 852137..852547 (+) 411 WP_000594935.1 peptide deformylase -
  P1I87_RS04605 (P1I87_04605) - 852584..854656 (-) 2073 WP_000726920.1 bifunctional metallophosphatase/5'-nucleotidase -
  P1I87_RS04610 (P1I87_04610) rcrR 854925..855365 (+) 441 WP_000431168.1 MarR family transcriptional regulator Regulator
  P1I87_RS04615 (P1I87_04615) rcrP 855412..857229 (+) 1818 WP_000481813.1 ABC transporter ATP-binding protein Regulator
  P1I87_RS04620 (P1I87_04620) rcrQ 857219..858973 (+) 1755 WP_000851087.1 ABC transporter ATP-binding protein Regulator
  P1I87_RS04625 (P1I87_04625) - 859081..859707 (+) 627 WP_000449644.1 GTP pyrophosphokinase -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16968.84 Da        Isoelectric Point: 9.8384

>NTDB_id=726646 P1I87_RS04610 WP_000431168.1 854925..855365(+) (rcrR) [Streptococcus agalactiae strain Guangzhou-SAG092]
MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIA
IVPSKTDKRVKYLYLTHLGKQKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMEDFD

Nucleotide


Download         Length: 441 bp        

>NTDB_id=726646 P1I87_RS04610 WP_000431168.1 854925..855365(+) (rcrR) [Streptococcus agalactiae strain Guangzhou-SAG092]
ATGGAGAATCCTCTTCAAAAAGCACGAATACTTGTTAATCAACTTGAAAAGTATTTAGATCGTTATGCAAAAGAGTATGA
TGTTGAACATTTAGCGGGTCCACAAGGACACTTAGTGATGCATCTCTATAAACATCCTGACAAGGATATGTCTATAAAAG
ATGCTGAAGAAATTTTACACATTTCTAAGTCTGTAGCGTCTAATTTGGTAAAACGGATGGAAAAAAATGGATTTATTGCG
ATTGTTCCATCTAAGACAGATAAGCGTGTGAAATACCTTTATTTGACTCATCTAGGTAAACAAAAGGCTACACAATTTGA
AATTTTCTTAGAAAAATTGCACAGTACCATGTTAGCAGGTATTACTAAAGAAGAGATACGTACTACCAAAAAGGTTATTA
GAACATTAGCTAAAAATATGGCGATGGAAGATTTTGATTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 7DVS

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

42.857

95.89

0.411