Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   P1I87_RS02290 Genome accession   NZ_CP119576
Coordinates   403348..404082 (+) Length   244 a.a.
NCBI ID   WP_000589162.1    Uniprot ID   Q8E1S3
Organism   Streptococcus agalactiae strain Guangzhou-SAG092     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 398348..409082
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P1I87_RS02275 (P1I87_02275) - 399270..400700 (+) 1431 WP_001217276.1 helix-turn-helix domain-containing protein -
  P1I87_RS02280 (P1I87_02280) recP/tkt 400825..402810 (+) 1986 WP_276131367.1 transketolase Machinery gene
  P1I87_RS02285 (P1I87_02285) - 403023..403328 (+) 306 WP_000711207.1 bacteriocin immunity protein -
  P1I87_RS02290 (P1I87_02290) pptA 403348..404082 (+) 735 WP_000589162.1 ABC transporter ATP-binding protein Regulator
  P1I87_RS02295 (P1I87_02295) - 404086..405690 (+) 1605 WP_001104587.1 ABC transporter permease -
  P1I87_RS02300 (P1I87_02300) - 405898..407283 (-) 1386 WP_001865878.1 PTS transporter subunit EIIC -
  P1I87_RS02305 (P1I87_02305) proB 407424..408227 (+) 804 WP_000820352.1 glutamate 5-kinase -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 27505.68 Da        Isoelectric Point: 4.7523

>NTDB_id=726630 P1I87_RS02290 WP_000589162.1 403348..404082(+) (pptA) [Streptococcus agalactiae strain Guangzhou-SAG092]
MIKFEHVSKVYGEKEALSDLTLSVKDGEIFGLIGHNGAGKTTTISILTSIIDATYGQVYIDDLLLTEHRDQIKKKIGYVP
DSPDIFLNLTAEEYWYFLAKIYDVAPEDIEARITKLVDIFELEEQRYNPIESFSHGMRQKVIVIGALLPNPDIWILDEPL
TGLDPQASFDLKEMMKEHAKNGKTVIFSTHVLAVAEQLCDRIGILKQGKLIFVGSLGELKMKYPDKDLETIYLELAGRQA
SREG

Nucleotide


Download         Length: 735 bp        

>NTDB_id=726630 P1I87_RS02290 WP_000589162.1 403348..404082(+) (pptA) [Streptococcus agalactiae strain Guangzhou-SAG092]
ATGATTAAGTTTGAACATGTTTCGAAAGTATACGGAGAAAAAGAAGCTCTCAGTGATTTAACCCTCTCTGTTAAAGATGG
TGAGATTTTTGGATTAATAGGTCACAATGGAGCAGGAAAAACAACGACAATTAGTATTCTAACATCTATTATTGATGCAA
CTTATGGCCAAGTCTATATTGATGACCTACTTTTGACAGAACATCGTGACCAAATTAAGAAAAAAATAGGTTATGTACCG
GACTCGCCAGATATTTTCTTAAATTTAACCGCAGAGGAATACTGGTACTTTTTAGCTAAAATTTATGACGTTGCCCCAGA
AGATATTGAAGCACGTATCACAAAATTGGTAGACATATTTGAACTAGAGGAGCAACGCTATAATCCTATTGAAAGTTTTT
CACATGGTATGCGTCAAAAAGTCATTGTTATAGGTGCCCTTCTTCCAAATCCTGACATTTGGATTCTAGATGAGCCGTTA
ACTGGTTTAGACCCTCAAGCTTCTTTTGATTTGAAAGAAATGATGAAAGAACATGCTAAAAATGGAAAAACAGTTATTTT
TTCAACACATGTCTTAGCAGTTGCAGAACAGTTATGCGACAGAATAGGTATTTTGAAACAAGGGAAATTAATCTTTGTCG
GTAGCTTAGGTGAGTTAAAAATGAAATATCCAGATAAAGATTTGGAAACTATCTATTTGGAATTAGCAGGACGTCAAGCT
AGTAGGGAGGGATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8E1S3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

38.683

99.59

0.385
  pptA Streptococcus salivarius strain HSISS4

38.272

99.59

0.381