Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PKHYL_RS14225 Genome accession   NZ_AP019516
Coordinates   2658063..2658440 (-) Length   125 a.a.
NCBI ID   WP_057761576.1    Uniprot ID   A0A7U6KS11
Organism   Psychrobacter sp. KH172YL61     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2653063..2663440
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PKHYL_RS14200 (PKHYL_34540) - 2654353..2654973 (-) 621 WP_332835974.1 CheR family methyltransferase -
  PKHYL_RS14205 (PKHYL_34550) - 2654946..2655281 (-) 336 WP_240365438.1 hypothetical protein -
  PKHYL_RS14210 - 2655391..2656622 (-) 1232 Protein_2878 methyl-accepting chemotaxis protein -
  PKHYL_RS14215 (PKHYL_34590) - 2656983..2657513 (-) 531 WP_071002987.1 chemotaxis protein CheW -
  PKHYL_RS14220 (PKHYL_34600) - 2657517..2657879 (-) 363 WP_071002986.1 response regulator -
  PKHYL_RS14225 (PKHYL_34610) pilG 2658063..2658440 (-) 378 WP_057761576.1 twitching motility response regulator PilG Regulator
  PKHYL_RS14230 - 2659119..2659850 (+) 732 WP_240365439.1 hypothetical protein -
  PKHYL_RS14235 (PKHYL_34630) - 2659826..2660374 (+) 549 WP_240365440.1 HlyD family efflux transporter periplasmic adaptor subunit -
  PKHYL_RS14240 - 2660682..2661404 (+) 723 Protein_2884 response regulator transcription factor -
  PKHYL_RS18270 (PKHYL_34660) - 2661481..2661915 (+) 435 WP_332835894.1 hypothetical protein -
  PKHYL_RS18275 (PKHYL_34670) - 2661908..2662285 (+) 378 WP_332835895.1 HAMP domain-containing protein -

Sequence

Protein


Download         Length: 125 a.a.        Molecular weight: 14054.13 Da        Isoelectric Point: 4.5807

>NTDB_id=72641 PKHYL_RS14225 WP_057761576.1 2658063..2658440(-) (pilG) [Psychrobacter sp. KH172YL61]
MENNFEGLKVMVIDDSKTIRRTAETLLQKAGCEVVTAIDGFDALAKIVDNNPDIIFVDIMMPRLDGYQTCALIKNNPDYA
NKPVIMLSSKDGLFDKARGRIVGSDEYLTKPFSKDELFDAINQYR

Nucleotide


Download         Length: 378 bp        

>NTDB_id=72641 PKHYL_RS14225 WP_057761576.1 2658063..2658440(-) (pilG) [Psychrobacter sp. KH172YL61]
ATGGAAAATAATTTTGAAGGTTTGAAAGTAATGGTGATTGATGATTCAAAAACCATTCGCCGTACCGCAGAAACCTTGCT
ACAAAAAGCGGGTTGTGAAGTCGTAACCGCTATAGATGGCTTCGATGCCTTAGCAAAAATTGTTGATAACAACCCAGATA
TTATTTTTGTCGACATCATGATGCCGCGCTTAGATGGCTATCAGACTTGTGCACTCATAAAAAATAACCCTGATTATGCT
AATAAACCCGTGATTATGTTGTCATCTAAAGATGGCTTATTTGATAAAGCCCGTGGCCGCATCGTCGGATCTGATGAGTA
TTTGACCAAACCATTTAGTAAAGATGAGCTTTTTGATGCGATTAACCAGTACCGTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U6KS11

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.226

99.2

0.776
  pilH Synechocystis sp. PCC 6803

41.228

91.2

0.376
  vicR Streptococcus mutans UA159

40.517

92.8

0.376

Multiple sequence alignment