Detailed information NTG0726322

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PX811_RS21630
• Genome accession: NZ_CP119404
• Coordinates: 4447035..4448060 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MRE162 substr. UK
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4442035..4453060

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PX811_RS21610 (PX811_004321)	metJ	4443096..4443413 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
PX811_RS21615 (PX811_004322)	yiiX	4443597..4444205 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
PX811_RS21620 (PX811_004323)	rpmE	4444266..4444478 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
PX811_RS21625 (PX811_004324)	priA	4444681..4446879 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
PX811_RS21630 (PX811_004325)	cytR	4447035..4448060 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
PX811_RS21635 (PX811_004326)	ftsN	4448152..4449111 (+)	960	WP_000068828.1	cell division protein FtsN	-
PX811_RS21640 (PX811_004327)	hslV	4449204..4449734 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
PX811_RS21645 (PX811_004328)	hslU	4449744..4451075 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
PX811_RS21650 (PX811_004329)	menA	4451142..4452068 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PX811_RS21655 (PX811_004330)	rraA	4452161..4452646 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
PX811_RS21660 (PX811_004331)	zapB	4452731..4452976 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=726322 PX811_RS21630 WP_000644904.1 4447035..4448060(+) (cytR) [Escherichia coli strain MRE162 substr. UK]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=726322 PX811_RS21630 WP_000644904.1 4447035..4448060(+) (cytR) [Escherichia coli strain MRE162 substr. UK]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628