Detailed information NTG0726306

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NY669_RS22630
• Genome accession: NZ_CP103872
• Coordinates: 5037190..5038410 (+)
• Length: 406 a.a.
• NCBI ID: WP_259433359.1
• Uniprot ID: -
• Organism: Herbaspirillum huttiense strain ZXN111
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5032190..5043410

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NY669_RS22605 (NY669_22605)	coaD	5032242..5032724 (-)	483	WP_006461533.1	pantetheine-phosphate adenylyltransferase	-
NY669_RS22610 (NY669_22610)	rsmD	5032761..5033429 (-)	669	WP_259433356.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
NY669_RS22615 (NY669_22615)	-	5033485..5034807 (-)	1323	WP_259433357.1	pitrilysin family protein	-
NY669_RS22620 (NY669_22620)	-	5034845..5035504 (-)	660	WP_034330674.1	ParA family protein	-
NY669_RS22625 (NY669_22625)	-	5035641..5037020 (-)	1380	WP_259433358.1	pitrilysin family protein	-
NY669_RS22630 (NY669_22630)	pilA	5037190..5038410 (+)	1221	WP_259433359.1	signal recognition particle-docking protein FtsY	Machinery gene
NY669_RS22635 (NY669_22635)	-	5038415..5039107 (+)	693	WP_121040482.1	cell division ATP-binding protein FtsE	-
NY669_RS22640 (NY669_22640)	ftsX	5039104..5040027 (+)	924	WP_259433360.1	permease-like cell division protein FtsX	-
NY669_RS22645 (NY669_22645)	-	5040045..5040986 (-)	942	WP_259433361.1	Abi family protein	-
NY669_RS22650 (NY669_22650)	rpoH	5041617..5042516 (+)	900	WP_034332696.1	RNA polymerase sigma factor RpoH	-
NY669_RS22655 (NY669_22655)	-	5042605..5043195 (-)	591	WP_034332698.1	SCO family protein	-

Sequence

Protein

• Length: 406 a.a.
• Molecular weight: 42694.33 Da
• Isoelectric Point: 5.4879

>NTDB_id=726306 NY669_RS22630 WP_259433359.1 5037190..5038410(+) (pilA) [Herbaspirillum huttiense strain ZXN111]
MFSFFKRKPKPEAQPALPPQAEPAAQPAPVVPPPTESVAPAPAAPAAVQPPVAAPAPVAPPAPTPIADPEPVPQPLTAPA
APPEPVAAIEESAEEVEIVAAPEPAPEVKRSWLSRLKAGLSKTSSNLTTLFVGARIDEDLYEELESALLVSDAGVEATQW
LLAELKKKVKNERLTEAAQVRTALRALLIDLLQPLQRPLVLGRDKPLVMMIAGVNGAGKTTTIGKLALHLQAHGQSVLLA
AGDTFRAAAREQLAVWGERNNVQVIAQESGDPAAVAYDSVHSAQARGTHVVMVDTAGRLPTQLHLMDELKKIKRVIAKAM
NSAPHEVLLVIDGNTGQNALAQVKAFDDALGLTGLVVTKLDGTAKGGILAAIAKTRPVPLYFIGVGEKIEDLQPFNATEF
VDALLS

Nucleotide

• Length: 1221 bp

>NTDB_id=726306 NY669_RS22630 WP_259433359.1 5037190..5038410(+) (pilA) [Herbaspirillum huttiense strain ZXN111]
ATGTTCAGTTTTTTCAAAAGAAAACCCAAACCGGAAGCGCAACCCGCGCTGCCGCCCCAGGCCGAACCGGCAGCCCAGCC
GGCCCCGGTGGTTCCGCCCCCGACTGAATCCGTTGCTCCTGCTCCTGCCGCTCCCGCTGCGGTTCAGCCACCAGTTGCCG
CGCCTGCACCGGTAGCACCGCCAGCCCCGACGCCGATCGCTGACCCGGAGCCTGTGCCCCAACCCTTGACTGCCCCGGCC
GCCCCCCCGGAGCCGGTGGCCGCCATCGAAGAGTCCGCCGAAGAAGTCGAGATCGTCGCCGCGCCGGAACCGGCCCCCGA
GGTCAAGCGCTCGTGGCTGTCGCGTCTGAAGGCCGGGCTGTCCAAGACCTCGAGCAACCTGACCACGCTGTTCGTGGGTG
CGCGCATCGATGAAGACTTGTACGAGGAACTGGAATCGGCCCTGCTGGTATCGGACGCCGGCGTGGAAGCCACCCAGTGG
CTGCTGGCCGAACTGAAGAAAAAGGTCAAAAACGAGCGCCTGACCGAAGCCGCCCAGGTGCGCACCGCCCTGCGCGCCCT
GCTGATCGACCTGCTGCAGCCGCTGCAGCGCCCGCTGGTGCTGGGCCGCGACAAGCCGCTGGTGATGATGATTGCCGGCG
TCAACGGTGCCGGCAAGACCACCACCATCGGCAAGCTGGCCCTGCATCTGCAGGCGCACGGCCAGTCGGTGCTGCTGGCC
GCCGGCGACACCTTCCGCGCTGCGGCCCGCGAGCAGCTGGCGGTCTGGGGCGAGCGCAACAACGTCCAGGTGATCGCGCA
GGAATCCGGCGATCCGGCCGCCGTCGCCTATGACTCGGTGCATTCGGCGCAAGCCCGCGGCACCCATGTGGTGATGGTCG
ATACCGCCGGCCGCCTGCCGACGCAATTGCACCTGATGGATGAACTCAAGAAGATCAAGCGGGTCATTGCCAAGGCGATG
AACTCGGCACCACATGAAGTGCTGCTGGTCATCGACGGCAACACCGGCCAGAATGCGCTGGCCCAGGTCAAGGCCTTCGA
TGATGCGCTGGGGCTGACCGGCCTGGTGGTGACCAAGCTGGATGGCACCGCCAAGGGCGGCATCCTGGCCGCCATTGCCA
AGACCCGCCCGGTGCCGCTGTACTTCATCGGCGTGGGCGAGAAGATCGAAGACCTGCAGCCGTTCAATGCCACCGAATTC
GTCGATGCCCTCCTGAGTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (207-405)

• SRP54-type protein, helical bundle domain (SRP54_N) (126-185)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.896	100	0.539