Detailed information NTG0726241

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PX810_RS21595
• Genome accession: NZ_CP119402
• Coordinates: 4441707..4442732 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MRE162 substr. FRA
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4436707..4447732

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PX810_RS21575 (PX810_004314)	metJ	4437768..4438085 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
PX810_RS21580 (PX810_004315)	yiiX	4438269..4438877 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
PX810_RS21585 (PX810_004316)	rpmE	4438938..4439150 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
PX810_RS21590 (PX810_004317)	priA	4439353..4441551 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
PX810_RS21595 (PX810_004318)	cytR	4441707..4442732 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
PX810_RS21600 (PX810_004319)	ftsN	4442824..4443783 (+)	960	WP_000068828.1	cell division protein FtsN	-
PX810_RS21605 (PX810_004320)	hslV	4443876..4444406 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
PX810_RS21610 (PX810_004321)	hslU	4444416..4445747 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
PX810_RS21615 (PX810_004322)	menA	4445814..4446740 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PX810_RS21620 (PX810_004323)	rraA	4446833..4447318 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
PX810_RS21625 (PX810_004324)	zapB	4447403..4447648 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=726241 PX810_RS21595 WP_000644904.1 4441707..4442732(+) (cytR) [Escherichia coli strain MRE162 substr. FRA]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=726241 PX810_RS21595 WP_000644904.1 4441707..4442732(+) (cytR) [Escherichia coli strain MRE162 substr. FRA]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628