Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NX081_RS07250 Genome accession   NZ_CP103856
Coordinates   1388697..1389161 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain SRCM116265     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1383697..1394161
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX081_RS07230 (NX081_07230) - 1384178..1385998 (+) 1821 WP_060561758.1 PAS domain-containing protein -
  NX081_RS07235 (NX081_07235) - 1385979..1387192 (-) 1214 Protein_1366 aminotransferase A -
  NX081_RS07240 (NX081_07240) - 1387393..1387554 (-) 162 WP_007409608.1 hypothetical protein -
  NX081_RS07245 (NX081_07245) cheV 1387743..1388654 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  NX081_RS07250 (NX081_07250) kre 1388697..1389161 (-) 465 WP_003154622.1 YkyB family protein Regulator
  NX081_RS07255 (NX081_07255) - 1389284..1390576 (-) 1293 WP_015239757.1 MFS transporter -
  NX081_RS07260 (NX081_07260) - 1390652..1391146 (-) 495 WP_088462390.1 L,D-transpeptidase family protein -
  NX081_RS07265 (NX081_07265) - 1391221..1392084 (-) 864 WP_060561757.1 metallophosphoesterase -
  NX081_RS07270 (NX081_07270) fadH 1392229..1392993 (+) 765 WP_060561756.1 2,4-dienoyl-CoA reductase -
  NX081_RS07275 (NX081_07275) - 1393158..1393654 (+) 497 Protein_1374 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=726078 NX081_RS07250 WP_003154622.1 1388697..1389161(-) (kre) [Bacillus velezensis strain SRCM116265]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=726078 NX081_RS07250 WP_003154622.1 1388697..1389161(-) (kre) [Bacillus velezensis strain SRCM116265]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAGTCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929