Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   NX081_RS05805 Genome accession   NZ_CP103856
Coordinates   1125762..1126715 (+) Length   317 a.a.
NCBI ID   WP_060562152.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM116265     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1120762..1131715
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX081_RS05780 (NX081_05780) argF 1122580..1123551 (+) 972 WP_012117275.1 ornithine carbamoyltransferase -
  NX081_RS05785 (NX081_05785) - 1123627..1123806 (+) 180 WP_003155070.1 YjzC family protein -
  NX081_RS05790 (NX081_05790) - 1123843..1124028 (-) 186 WP_007409129.1 YjzD family protein -
  NX081_RS05795 (NX081_05795) - 1124289..1125023 (+) 735 WP_060562151.1 hypothetical protein -
  NX081_RS05800 (NX081_05800) - 1125106..1125672 (+) 567 WP_017417444.1 hypothetical protein -
  NX081_RS05805 (NX081_05805) med 1125762..1126715 (+) 954 WP_060562152.1 BMP family ABC transporter substrate-binding protein Regulator
  NX081_RS05810 (NX081_05810) comZ 1126728..1126919 (+) 192 WP_003155061.1 ComZ family protein Regulator
  NX081_RS05815 (NX081_05815) - 1126948..1127166 (-) 219 WP_007409123.1 hypothetical protein -
  NX081_RS05820 (NX081_05820) - 1127333..1128271 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  NX081_RS05825 (NX081_05825) fabF 1128294..1129532 (+) 1239 WP_060562153.1 beta-ketoacyl-ACP synthase II -
  NX081_RS05830 (NX081_05830) - 1129616..1130401 (+) 786 WP_060562154.1 DUF2268 domain-containing protein -
  NX081_RS05835 (NX081_05835) - 1130575..1131561 (+) 987 WP_033574515.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35328.92 Da        Isoelectric Point: 4.6067

>NTDB_id=726070 NX081_RS05805 WP_060562152.1 1125762..1126715(+) (med) [Bacillus velezensis strain SRCM116265]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYENPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=726070 NX081_RS05805 WP_060562152.1 1125762..1126715(+) (med) [Bacillus velezensis strain SRCM116265]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAACCCTGATATCACCGTCAACACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTGAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.864

100

0.789