Detailed information NTG0726026

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NY025_RS23735
• Genome accession: NZ_CP103852
• Coordinates: 3406733..3407872 (+)
• Length: 379 a.a.
• NCBI ID: WP_193026599.1
• Uniprot ID: -
• Organism: Ralstonia pseudosolanacearum strain LMG 9673
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3401733..3412872

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NY025_RS23710 (NY025_23710)	-	3402089..3402337 (-)	249	WP_011000353.1	YfhL family 4Fe-4S dicluster ferredoxin	-
NY025_RS23715 (NY025_23715)	coaD	3402388..3402894 (-)	507	WP_003262550.1	pantetheine-phosphate adenylyltransferase	-
NY025_RS23720 (NY025_23720)	rsmD	3403090..3403737 (-)	648	WP_193026596.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
NY025_RS23725 (NY025_23725)	-	3403818..3405161 (-)	1344	WP_193026597.1	pitrilysin family protein	-
NY025_RS23730 (NY025_23730)	-	3405161..3406672 (-)	1512	WP_193026598.1	pitrilysin family protein	-
NY025_RS23735 (NY025_23735)	pilA	3406733..3407872 (+)	1140	WP_193026599.1	signal recognition particle-docking protein FtsY	Machinery gene
NY025_RS23740 (NY025_23740)	-	3407869..3408507 (-)	639	WP_020749764.1	LysE/ArgO family amino acid transporter	-
NY025_RS23745 (NY025_23745)	maiA	3408504..3409154 (-)	651	WP_193026600.1	maleylacetoacetate isomerase	-
NY025_RS23750 (NY025_23750)	-	3409158..3409859 (-)	702	WP_064050376.1	fumarylacetoacetate hydrolase family protein	-
NY025_RS23755 (NY025_23755)	-	3410007..3410633 (+)	627	WP_193026601.1	ANTAR domain-containing response regulator	-
NY025_RS23760 (NY025_23760)	-	3410910..3412172 (+)	1263	WP_020749769.1	CmpA/NrtA family ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 379 a.a.
• Molecular weight: 40171.39 Da
• Isoelectric Point: 5.8101

>NTDB_id=726026 NY025_RS23735 WP_193026599.1 3406733..3407872(+) (pilA) [Ralstonia pseudosolanacearum strain LMG 9673]
MFSFWKKRKAEPQPAAEPAPPAAAPEAAQAPAPAPAPVAAPVPTPAPAPVAVPDTPAAPAALDMQADDIETVPTPPVVEQ
ARKGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAEGVKTALRDL
LIELLHPLEKTMVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQ
ESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKAFD
DTLGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Nucleotide

• Length: 1140 bp

>NTDB_id=726026 NY025_RS23735 WP_193026599.1 3406733..3407872(+) (pilA) [Ralstonia pseudosolanacearum strain LMG 9673]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACCGGCGCCGCCCGCCGCCGCACCCGAAGC
CGCACAGGCTCCTGCCCCGGCCCCAGCCCCGGTTGCCGCCCCCGTCCCCACGCCGGCGCCCGCCCCGGTCGCCGTGCCGG
ATACGCCGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGACGACATCGAGACCGTGCCGACGCCGCCCGTGGTGGAGCAG
GCACGCAAGGGCTGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGAGCCTGACCACGCTGTTCGTCGGCGT
GAAGGTGGACGAAGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTCGATGCCACCGAATACC
TGCTGGACGAACTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGCGACCTG
CTCATCGAGCTGCTGCATCCGCTCGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGACGGTGATCATGATCGCGGGCGT
CAACGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTATGGACAGTCCGTGCTGCTGGCCG
CCGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAGTTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAG
GAATCGGGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGTGCCCGCGGCATCGACATCGTCATGGCCGA
CACCGCCGGCCGCCTGCCGACCCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAGGCGATGG
CGACCGCGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAAGCCTTCGAC
GATACGCTCGGCCTGACCGGCCTGATCGTCACCAAGCTGGACGGCACCGCCAAGGGCGGCATCCTGGCCGCCATCGCGCG
GCAGCGGCCGGTACCGGTGTATTTCATCGGCGTGGGCGAGCAGGTGGAAGACCTGCAGCCGTTCTCCGCGCGCGAGTTCG
CCGACGCGCTGCTGGGCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (179-379)

• SRP54-type protein, helical bundle domain (SRP54_N) (98-159)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.923	100	0.57