Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   P1A16_RS00120 Genome accession   NZ_CP119344
Coordinates   29457..30257 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain N29CSA11     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 24457..35257
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P1A16_RS00105 (P1A16_00105) walK 25119..26945 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  P1A16_RS00110 (P1A16_00110) yycH 26938..28272 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  P1A16_RS00115 (P1A16_00115) yycI 28273..29061 (+) 789 WP_001104166.1 two-component system regulatory protein YycI -
  P1A16_RS00120 (P1A16_00120) vicX 29457..30257 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  P1A16_RS00125 (P1A16_00125) adsA 30484..32442 (+) 1959 Protein_22 LPXTG-anchored adenosine synthase AdsA -
  P1A16_RS00130 (P1A16_00130) - 32497..33171 (+) 675 WP_001105994.1 IS6-like element IS257 family transposase -
  P1A16_RS00135 (P1A16_00135) - 33230..33577 (+) 348 Protein_24 DUF3883 domain-containing protein -
  P1A16_RS00140 (P1A16_00140) - 33992..34231 (+) 240 WP_001282728.1 hypothetical protein -
  P1A16_RS00145 (P1A16_00145) - 34263..34937 (-) 675 WP_001106057.1 IS6-like element IS257 family transposase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=726005 P1A16_RS00120 WP_000088649.1 29457..30257(+) (vicX) [Staphylococcus aureus strain N29CSA11]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=726005 P1A16_RS00120 WP_000088649.1 29457..30257(+) (vicX) [Staphylococcus aureus strain N29CSA11]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGTGATATGGGACATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474