Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   P1A17_RS05040 Genome accession   NZ_CP119341
Coordinates   1023430..1024149 (+) Length   239 a.a.
NCBI ID   WP_001217723.1    Uniprot ID   -
Organism   Staphylococcus aureus strain N29CSA02     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1018430..1029149
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P1A17_RS05020 (P1A17_05015) opp4C 1019125..1020006 (+) 882 WP_001180280.1 oligopeptide ABC transporter permease -
  P1A17_RS05025 (P1A17_05020) trpS 1020048..1021037 (-) 990 WP_031589556.1 tryptophan--tRNA ligase -
  P1A17_RS05030 (P1A17_05025) spxA 1021332..1021727 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  P1A17_RS05035 (P1A17_05030) - 1022032..1023204 (-) 1173 WP_000195429.1 IS256-like element IS256 family transposase -
  P1A17_RS05040 (P1A17_05035) mecA 1023430..1024149 (+) 720 WP_001217723.1 adaptor protein MecA Regulator
  P1A17_RS05045 (P1A17_05040) coiA 1024270..1025256 (+) 987 WP_000959292.1 competence protein CoiA family protein Machinery gene
  P1A17_RS05050 (P1A17_05045) pepF 1025304..1027112 (+) 1809 WP_000082725.1 oligoendopeptidase F Regulator
  P1A17_RS05055 (P1A17_05050) yjbH 1027572..1028378 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  P1A17_RS05060 (P1A17_05055) - 1028401..1028766 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -

Sequence

Protein


Download         Length: 239 a.a.        Molecular weight: 28285.17 Da        Isoelectric Point: 4.1548

>NTDB_id=725941 P1A17_RS05040 WP_001217723.1 1023430..1024149(+) (mecA) [Staphylococcus aureus strain N29CSA02]
MRIERVDDTTVKLFITYSDIEARGFSREDLWTNRKRGEEFFWSMMDEINEEEDFVVEGPLWIQVHAFEKGVEVTISKSKN
EDMMNMSDDDATDQFDEQVQELLAQTLEGEDQLEELFDQRTKEKEAQGSKRQKSSARKNTRTIIVKFNDLEDVINYAYHS
NPITTEFEDLLYMVDGTYYYAVHFDSHVDQEVINDSYSQLLEFAYPTDRTEVYLNDYAKIIMSHNVTAQVRRYFPETTE

Nucleotide


Download         Length: 720 bp        

>NTDB_id=725941 P1A17_RS05040 WP_001217723.1 1023430..1024149(+) (mecA) [Staphylococcus aureus strain N29CSA02]
ATGAGAATAGAACGAGTAGATGATACAACTGTAAAATTGTTTATAACATATAGCGATATCGAGGCCCGTGGATTTAGTCG
TGAAGATTTATGGACAAATCGCAAACGTGGCGAAGAATTCTTTTGGTCAATGATGGATGAAATTAACGAAGAAGAAGATT
TTGTTGTAGAAGGTCCATTATGGATTCAAGTACATGCCTTTGAAAAAGGTGTCGAAGTCACAATTTCTAAATCTAAAAAT
GAAGATATGATGAATATGTCTGATGATGATGCAACTGATCAATTTGATGAACAAGTTCAAGAATTGTTAGCTCAAACATT
AGAAGGTGAAGATCAATTAGAAGAATTATTCGATCAACGAACAAAAGAAAAAGAAGCTCAAGGTTCTAAACGTCAAAAGT
CTTCAGCACGTAAAAATACAAGAACAATTATTGTGAAATTTAACGATTTAGAAGATGTTATTAATTATGCATATCATAGC
AATCCAATAACTACAGAGTTTGAAGATTTGTTATATATGGTTGATGGTACTTATTATTATGCTGTACATTTTGATAGTCA
TGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGTTTATT
TAAATGACTATGCTAAAATAATTATGAGTCATAACGTAACAGCTCAAGTTCGACGTTATTTTCCAGAGACAACTGAATAA

Domains

Predicted by InterProScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-229)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

37.975

99.163

0.377