Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   P1A17_RS00120 Genome accession   NZ_CP119341
Coordinates   29457..30257 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain N29CSA02     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 24457..35257
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P1A17_RS00105 (P1A17_00105) walK 25119..26945 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  P1A17_RS00110 (P1A17_00110) yycH 26938..28272 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  P1A17_RS00115 (P1A17_00115) yycI 28273..29061 (+) 789 WP_001104166.1 two-component system regulatory protein YycI -
  P1A17_RS00120 (P1A17_00120) vicX 29457..30257 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  P1A17_RS00125 (P1A17_00125) adsA 30484..32802 (+) 2319 WP_000645770.1 LPXTG-anchored adenosine synthase AdsA -
  P1A17_RS00130 (P1A17_00130) rlmH 33170..33649 (+) 480 WP_031588515.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  P1A17_RS00135 (P1A17_00135) - 34242..34631 (+) 390 WP_049948298.1 DUF6339 family protein -
  P1A17_RS00140 (P1A17_00145) - 35015..35218 (+) 204 WP_209307420.1 helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=725918 P1A17_RS00120 WP_000088649.1 29457..30257(+) (vicX) [Staphylococcus aureus strain N29CSA02]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=725918 P1A17_RS00120 WP_000088649.1 29457..30257(+) (vicX) [Staphylococcus aureus strain N29CSA02]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGTGATATGGGACATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474