Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   NYR99_RS16390 Genome accession   NZ_CP103840
Coordinates   3743803..3744204 (-) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas dyei strain 22-325     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3738803..3749204
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYR99_RS16375 (NYR99_16340) - 3740817..3742853 (-) 2037 WP_228323960.1 methyl-accepting chemotaxis protein -
  NYR99_RS16380 (NYR99_16345) - 3742893..3743423 (-) 531 WP_228323959.1 chemotaxis protein CheW -
  NYR99_RS16385 (NYR99_16350) - 3743423..3743785 (-) 363 WP_006450735.1 response regulator -
  NYR99_RS16390 (NYR99_16355) pilG 3743803..3744204 (-) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  NYR99_RS16395 (NYR99_16360) gshB 3744441..3745391 (+) 951 WP_104616123.1 glutathione synthase -
  NYR99_RS16400 (NYR99_16365) - 3745388..3746263 (+) 876 WP_104616122.1 energy transducer TonB -
  NYR99_RS16405 (NYR99_16370) - 3746468..3747385 (-) 918 WP_316687682.1 ADP-ribosylglycohydrolase family protein -
  NYR99_RS16410 (NYR99_16375) tsaB 3747382..3748101 (-) 720 WP_228323956.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=725900 NYR99_RS16390 WP_005913706.1 3743803..3744204(-) (pilG) [Xanthomonas dyei strain 22-325]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=725900 NYR99_RS16390 WP_005913706.1 3743803..3744204(-) (pilG) [Xanthomonas dyei strain 22-325]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAGACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCGACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTTGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGTGCGTTGATCAAG
GGCAACCAGCTCTTCAAGTCGACGCCGGTGATCATGTTGTCTTCCAAGGATGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGCTCCGAGCAATATCTGACCAAGCCATTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684