Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   P1A15_RS09605 Genome accession   NZ_CP119340
Coordinates   1970123..1970863 (-) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain N28CSA05     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1965123..1975863
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P1A15_RS09580 (P1A15_09580) hemH 1965999..1966922 (-) 924 WP_000162881.1 ferrochelatase -
  P1A15_RS09585 (P1A15_09585) hemE 1966980..1968017 (-) 1038 WP_031774967.1 uroporphyrinogen decarboxylase -
  P1A15_RS09590 (P1A15_09590) - 1968007..1968117 (-) 111 WP_001790154.1 hypothetical protein -
  P1A15_RS09595 (P1A15_09595) traP 1968280..1968783 (+) 504 WP_000737978.1 signal transduction protein TRAP -
  P1A15_RS09600 (P1A15_09600) - 1968907..1970130 (-) 1224 WP_000551839.1 ABC transporter permease -
  P1A15_RS09605 (P1A15_09605) pptA 1970123..1970863 (-) 741 WP_000216874.1 ABC transporter ATP-binding protein Regulator
  P1A15_RS09610 (P1A15_09610) - 1970997..1971419 (+) 423 WP_000004986.1 HIT family protein -
  P1A15_RS09615 (P1A15_09615) - 1971561..1971926 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  P1A15_RS09620 (P1A15_09620) - 1972659..1973216 (+) 558 WP_000477960.1 DUF3267 domain-containing protein -
  P1A15_RS09625 (P1A15_09625) - 1973421..1974383 (+) 963 WP_000782121.1 foldase protein PrsA -
  P1A15_RS09630 (P1A15_09630) yhaM 1974504..1975445 (-) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=725898 P1A15_RS09605 WP_000216874.1 1970123..1970863(-) (pptA) [Staphylococcus aureus strain N28CSA05]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=725898 P1A15_RS09605 WP_000216874.1 1970123..1970863(-) (pptA) [Staphylococcus aureus strain N28CSA05]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545