Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   P1A14_RS03865 Genome accession   NZ_CP119338
Coordinates   789349..790023 (+) Length   224 a.a.
NCBI ID   WP_001166500.1    Uniprot ID   Q99VW2
Organism   Staphylococcus aureus strain N09HSA11     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 784349..795023
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P1A14_RS03840 (P1A14_03840) - 784564..785631 (+) 1068 WP_000980137.1 membrane protein -
  P1A14_RS03845 (P1A14_03845) - 785782..786825 (+) 1044 WP_001030771.1 alpha/beta hydrolase -
  P1A14_RS03850 (P1A14_03850) - 787154..787582 (+) 429 WP_000198504.1 hypothetical protein -
  P1A14_RS03855 (P1A14_03855) - 787791..788297 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  P1A14_RS03860 (P1A14_03860) graX 788410..789333 (+) 924 WP_031589015.1 auxiliary protein GraX/ApsX -
  P1A14_RS03865 (P1A14_03865) braR 789349..790023 (+) 675 WP_001166500.1 response regulator transcription factor GraR/ApsR Regulator
  P1A14_RS03870 (P1A14_03870) graS 790016..791056 (+) 1041 WP_001061247.1 histidine kinase GraS/ApsS -
  P1A14_RS03875 (P1A14_03875) vraF 791200..791961 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  P1A14_RS03880 (P1A14_03880) vraG 791951..793840 (+) 1890 WP_031589022.1 ABC transporter permease VraG -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26065.87 Da        Isoelectric Point: 4.3563

>NTDB_id=725755 P1A14_RS03865 WP_001166500.1 789349..790023(+) (braR) [Staphylococcus aureus strain N09HSA11]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=725755 P1A14_RS03865 WP_001166500.1 789349..790023(+) (braR) [Staphylococcus aureus strain N09HSA11]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q99VW2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397