Detailed information NTG0072527

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: E0718_RS18170
• Genome accession: NZ_AP019378
• Coordinates: 3826173..3827372 (-)
• Length: 399 a.a.
• NCBI ID: WP_041937118.1
• Uniprot ID: -
• Organism: Bordetella parapertussis strain Bpp01
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3821173..3832372

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E0718_RS18150 (NB2BOR_A36580)	phnC	3821814..3822584 (+)	771	WP_010927715.1	phosphonate ABC transporter ATP-binding protein	-
E0718_RS18155 (NB2BOR_A36590)	phnE	3822602..3823471 (+)	870	WP_169507383.1	phosphonate ABC transporter, permease protein PhnE	-
E0718_RS18160 (NB2BOR_A36600)	phnE	3823468..3824289 (+)	822	WP_003808584.1	phosphonate ABC transporter, permease protein PhnE	-
E0718_RS18165 (NB2BOR_A36610)	-	3824528..3826126 (+)	1599	WP_010927713.1	CYTH and CHAD domain-containing protein	-
E0718_RS18170 (NB2BOR_A36620)	pilA	3826173..3827372 (-)	1200	WP_041937118.1	signal recognition particle-docking protein FtsY	Machinery gene
E0718_RS18175 (NB2BOR_A36630)	rsmD	3827448..3828068 (+)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
E0718_RS18180 (NB2BOR_A36640)	coaD	3828089..3828598 (+)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
E0718_RS18185 (NB2BOR_A36650)	-	3828653..3828904 (+)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
E0718_RS18190 (NB2BOR_A36660)	-	3828901..3830118 (+)	1218	WP_003808568.1	benzoate/H(+) symporter BenE family transporter	-
E0718_RS18195 (NB2BOR_A36670)	-	3830126..3830512 (-)	387	WP_010927711.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 399 a.a.
• Molecular weight: 41695.66 Da
• Isoelectric Point: 5.2904

>NTDB_id=72527 E0718_RS18170 WP_041937118.1 3826173..3827372(-) (pilA) [Bordetella parapertussis strain Bpp01]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPAPMPAPQPEPQPEPQPQQPPEPAPPAMASPPVAESQPP
VAEPQPPVAAAPEAPRKASWLSRLKQGLSRTGQNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKE
RIDDPAQVKTALRQLLADHLWPLERSFDLGRAQPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQ
LVEWGSRNNVTVISQDGGDPAAVAFDSVNAGRARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVD
GNTGQNALAQIRAFDAAITLTGLVVTKLDGTAKGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1200 bp

>NTDB_id=72527 E0718_RS18170 WP_041937118.1 3826173..3827372(-) (pilA) [Bordetella parapertussis strain Bpp01]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAACCGGCCCCGATGCCGGCCCCCCAGCCCGAGCCGCAGC
CCGAGCCGCAGCCGCAACAACCGCCCGAGCCGGCGCCGCCGGCCATGGCGTCGCCGCCTGTCGCCGAGTCGCAGCCACCG
GTCGCCGAGCCGCAGCCACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGG
CCTGTCGCGCACCGGCCAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGT
CGGCGCTGATCATGGCCGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAG
CGCATCGACGATCCGGCGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGTGGCCGCTGGAGCGGTCCTT
CGACCTGGGGCGGGCCCAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGC
TGGCGCATACCTTCCAGCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAA
TTGGTCGAATGGGGCAGCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTC
GGTCAATGCCGGACGTGCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGA
TGGAAGAATTGAAGAAGATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGAT
GGCAACACCGGCCAGAACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAA
GCTGGACGGCACCGCCAAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATT
GGATCGGCGTGGGCGAGGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (195-397)

• SRP54-type protein, helical bundle domain (SRP54_N) (115-174)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.7	100	0.516