Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NYR91_RS07705 Genome accession   NZ_CP103784
Coordinates   1467778..1468362 (+) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus subtilis strain RO-NN-1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1462778..1473362
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYR91_RS07675 (NYR91_07675) dapD 1462966..1463676 (+) 711 WP_041519262.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NYR91_RS07680 (NYR91_07680) dapI 1463746..1464870 (+) 1125 WP_014476668.1 N-acetyldiaminopimelate deacetylase -
  NYR91_RS07685 (NYR91_07685) ykuS 1464932..1465177 (+) 246 WP_003232382.1 YkuS family protein -
  NYR91_RS07690 (NYR91_07690) mscT 1465214..1466017 (-) 804 WP_014476669.1 small-conductance mechanosensitive channel protein MscT -
  NYR91_RS07695 (NYR91_07695) ahpA 1466254..1466796 (+) 543 WP_014476670.1 biofilm-specific peroxidase AhpA -
  NYR91_RS07700 (NYR91_07700) ykuV 1466867..1467313 (+) 447 WP_014476671.1 thiol-disulfide oxidoreductase YkuV -
  NYR91_RS07705 (NYR91_07705) rok 1467778..1468362 (+) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  NYR91_RS07710 (NYR91_07710) cse15 1468403..1469368 (-) 966 WP_014476672.1 spore protein Cse15 -
  NYR91_RS07715 (NYR91_07715) mobA 1469505..1470104 (+) 600 WP_014476673.1 molybdenum cofactor guanylyltransferase -
  NYR91_RS07720 (NYR91_07720) moeB 1470155..1471174 (+) 1020 WP_014476674.1 molybdopterin-synthase adenylyltransferase MoeB -
  NYR91_RS07725 (NYR91_07725) glp 1471192..1472484 (+) 1293 WP_014476675.1 gephyrin-like molybdotransferase Glp -
  NYR91_RS07730 (NYR91_07730) mobB 1472445..1472966 (+) 522 WP_014476676.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=725008 NYR91_RS07705 WP_014113628.1 1467778..1468362(+) (rok) [Bacillus subtilis strain RO-NN-1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=725008 NYR91_RS07705 WP_014113628.1 1467778..1468362(+) (rok) [Bacillus subtilis strain RO-NN-1]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAACTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAAGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974