Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NYR91_RS07605 Genome accession   NZ_CP103784
Coordinates   1451926..1452390 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain RO-NN-1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1446926..1457390
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYR91_RS07585 (NYR91_07585) kinA 1447393..1449213 (+) 1821 WP_014476652.1 sporulation histidine kinase KinA -
  NYR91_RS07590 (NYR91_07590) dapX 1449223..1450404 (-) 1182 WP_014476653.1 aminotransferase A -
  NYR91_RS07595 (NYR91_07595) - 1450606..1450767 (-) 162 WP_014476654.1 hypothetical protein -
  NYR91_RS07600 (NYR91_07600) cheV 1450971..1451882 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  NYR91_RS07605 (NYR91_07605) kre 1451926..1452390 (-) 465 WP_003232406.1 YkyB family protein Regulator
  NYR91_RS07610 (NYR91_07610) ykuC 1452516..1453808 (-) 1293 WP_014476656.1 MFS transporter -
  NYR91_RS07615 (NYR91_07615) ltdD 1453884..1454378 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  NYR91_RS07620 (NYR91_07620) ppeE 1454435..1455295 (-) 861 WP_014476658.1 metallophosphoesterase -
  NYR91_RS07625 (NYR91_07625) fadH 1455438..1456202 (+) 765 WP_014476659.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=725007 NYR91_RS07605 WP_003232406.1 1451926..1452390(-) (kre) [Bacillus subtilis strain RO-NN-1]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=725007 NYR91_RS07605 WP_003232406.1 1451926..1452390(-) (kre) [Bacillus subtilis strain RO-NN-1]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTGTTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCTGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1