Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   NYR91_RS06065 Genome accession   NZ_CP103784
Coordinates   1179310..1180263 (+) Length   317 a.a.
NCBI ID   WP_014476425.1    Uniprot ID   A0A0K6M9I2
Organism   Bacillus subtilis strain RO-NN-1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1174310..1185263
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYR91_RS06040 (NYR91_06040) argF 1176141..1177100 (+) 960 WP_014476421.1 ornithine carbamoyltransferase -
  NYR91_RS06045 (NYR91_06045) yjzC 1177186..1177365 (+) 180 WP_003245356.1 YjzC family protein -
  NYR91_RS06050 (NYR91_06050) yjzD 1177412..1177597 (-) 186 WP_014476422.1 YjzD family protein -
  NYR91_RS06055 (NYR91_06055) - 1177846..1178580 (+) 735 WP_003245223.1 hypothetical protein -
  NYR91_RS06060 (NYR91_06060) - 1178662..1179219 (+) 558 WP_014476424.1 hypothetical protein -
  NYR91_RS06065 (NYR91_06065) med 1179310..1180263 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  NYR91_RS06070 (NYR91_06070) comZ 1180278..1180469 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  NYR91_RS06075 (NYR91_06075) yjzB 1180499..1180735 (-) 237 WP_015383342.1 spore coat protein YjzB -
  NYR91_RS06080 (NYR91_06080) fabH 1180900..1181838 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  NYR91_RS06085 (NYR91_06085) fabF 1181861..1183102 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  NYR91_RS06090 (NYR91_06090) yjaZ 1183178..1183963 (+) 786 WP_014476427.1 DUF2268 domain-containing protein -
  NYR91_RS06095 (NYR91_06095) appD 1184155..1185141 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35310.84 Da        Isoelectric Point: 4.6031

>NTDB_id=724998 NYR91_RS06065 WP_014476425.1 1179310..1180263(+) (med) [Bacillus subtilis strain RO-NN-1]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=724998 NYR91_RS06065 WP_014476425.1 1179310..1180263(+) (med) [Bacillus subtilis strain RO-NN-1]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCACATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTATATCCCGCCGGAGACG
GATATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAACAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGGACATTCAGCCCGCTCGTCGATA
AAGACTTTCAGCAAAGAATCGCTAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0K6M9I2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

99.685

100

0.997