Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NYR91_RS04580 Genome accession   NZ_CP103784
Coordinates   904472..905266 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain RO-NN-1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 899472..910266
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYR91_RS04550 (NYR91_04550) sxzA 900311..901342 (+) 1032 WP_003233568.1 iron chelate uptake ABC transporter family permease subunit -
  NYR91_RS04555 (NYR91_04555) yfhB 901457..902338 (+) 882 WP_014476205.1 PhzF family phenazine biosynthesis isomerase -
  NYR91_RS04560 (NYR91_04560) yfhC 902426..903010 (+) 585 WP_014476206.1 nitroreductase -
  NYR91_RS04565 (NYR91_04565) yfhD 903049..903240 (-) 192 WP_003233561.1 YfhD family protein -
  NYR91_RS04570 (NYR91_04570) yfhE 903307..903417 (-) 111 WP_003223230.1 YfhE family protein -
  NYR91_RS04575 (NYR91_04575) yfhF 903472..904383 (-) 912 WP_014476207.1 TIGR01777 family oxidoreductase -
  NYR91_RS04580 (NYR91_04580) recX 904472..905266 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  NYR91_RS04585 (NYR91_04585) yfhH 905268..905582 (+) 315 WP_014476208.1 YfhH family protein -
  NYR91_RS04590 (NYR91_04590) yfhI 905726..906919 (+) 1194 WP_014476209.1 MFS transporter -
  NYR91_RS04595 (NYR91_04595) sspK 906951..907103 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  NYR91_RS04600 (NYR91_04600) yfhJ 907228..907497 (+) 270 WP_003243789.1 YfhJ family protein -
  NYR91_RS04605 (NYR91_04605) yfhK 907640..908158 (+) 519 WP_014476210.1 SH3 domain-containing protein -
  NYR91_RS04610 (NYR91_04610) spdL 908243..908575 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  NYR91_RS04615 (NYR91_04615) ephM 908562..909422 (+) 861 WP_041519173.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=724990 NYR91_RS04580 WP_003243354.1 904472..905266(+) (recX) [Bacillus subtilis strain RO-NN-1]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=724990 NYR91_RS04580 WP_003243354.1 904472..905266(+) (recX) [Bacillus subtilis strain RO-NN-1]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACGAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCATTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1