Detailed information NTG0072489

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: JUD77_RS02595
• Genome accession: NZ_AP024414
• Coordinates: 526986..527984 (-)
• Length: 332 a.a.
• NCBI ID: WP_005686992.1
• Uniprot ID: A0ABY1VT38
• Organism: Haemophilus influenzae strain TA8730
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 521986..532984

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JUD77_RS02570 (TA8730_04870)	tehA	522960..523904 (+)	945	WP_071162914.1	dicarboxylate transporter/tellurite-resistance protein TehA	-
JUD77_RS02575 (TA8730_04880)	tsaA	523957..524676 (-)	720	WP_071162913.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
JUD77_RS02580 (TA8730_04890)	menA	524738..525649 (+)	912	WP_071162912.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
JUD77_RS02585 (TA8730_04900)	rraA	525701..526189 (+)	489	WP_005649446.1	ribonuclease E activity regulator RraA	-
JUD77_RS02590 (TA8730_04910)	-	526329..526880 (-)	552	WP_005649445.1	TIGR00645 family protein	-
JUD77_RS02595 (TA8730_04920)	cytR	526986..527984 (-)	999	WP_005686992.1	substrate-binding domain-containing protein	Regulator
JUD77_RS02600 (TA8730_04930)	rbsK	528012..528932 (-)	921	WP_071162911.1	ribokinase	-
JUD77_RS02605 (TA8730_04940)	rbsB	529029..529907 (-)	879	WP_071162910.1	ribose ABC transporter substrate-binding protein RbsB	-
JUD77_RS02610 (TA8730_04950)	rbsC	529927..530895 (-)	969	WP_071162909.1	ribose ABC transporter permease	-
JUD77_RS02615 (TA8730_04960)	rbsA	530911..532392 (-)	1482	WP_114877260.1	ribose ABC transporter ATP-binding protein RbsA	-
JUD77_RS02620 (TA8730_04970)	rbsD	532406..532825 (-)	420	WP_012055067.1	D-ribose pyranase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36749.46 Da
• Isoelectric Point: 7.9562

>NTDB_id=72489 JUD77_RS02595 WP_005686992.1 526986..527984(-) (cytR) [Haemophilus influenzae strain TA8730]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVETLLQRIKNPNENYRTLVLEP
TCVLRESIYSFK

Nucleotide

• Length: 999 bp

>NTDB_id=72489 JUD77_RS02595 WP_005686992.1 526986..527984(-) (cytR) [Haemophilus influenzae strain TA8730]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCCACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCCTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGGCTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCCATTTCGCTGCCACTGGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATCGATGCAGGACATCGTAAAATTGGCATTATTACGGGAAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTGTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTCGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGCTATGATGACATTGAATTGGCTCGTTATCTCTCACCTCCCCTTTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCGCACTTTGGTGTTAGAACCG
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.89	98.795	0.364
cytR	Vibrio cholerae C6706	36.585	98.795	0.361