Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   NYR48_RS05935 Genome accession   NZ_CP103782
Coordinates   1156142..1156798 (+) Length   218 a.a.
NCBI ID   WP_045925332.1    Uniprot ID   A0AAE2NT84
Organism   Bacillus velezensis strain DA4     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1151142..1161798
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYR48_RS05910 oppF 1151672..1152589 (+) 918 WP_012117283.1 oligopeptide ABC transporter ATP-binding protein OppF -
  NYR48_RS05915 - 1152696..1153883 (+) 1188 WP_015239569.1 putative glycoside hydrolase -
  NYR48_RS05920 - 1154001..1154579 (+) 579 WP_007409110.1 GNAT family N-acetyltransferase -
  NYR48_RS05925 spx 1154758..1155153 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  NYR48_RS05930 - 1155210..1155866 (-) 657 WP_259425284.1 TerC family protein -
  NYR48_RS05935 mecA 1156142..1156798 (+) 657 WP_045925332.1 adaptor protein MecA Regulator
  NYR48_RS05940 - 1156949..1158109 (+) 1161 WP_259425285.1 competence protein CoiA family protein -
  NYR48_RS05945 pepF 1158337..1160166 (+) 1830 WP_259425612.1 oligoendopeptidase F Regulator
  NYR48_RS05950 - 1160204..1160371 (-) 168 WP_003155026.1 hypothetical protein -
  NYR48_RS05955 spxH 1160658..1161560 (-) 903 WP_003155024.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25963.77 Da        Isoelectric Point: 4.1345

>NTDB_id=724840 NYR48_RS05935 WP_045925332.1 1156142..1156798(+) (mecA) [Bacillus velezensis strain DA4]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFENR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=724840 NYR48_RS05935 WP_045925332.1 1156142..1156798(+) (mecA) [Bacillus velezensis strain DA4]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAAACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
TGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.908

100

0.899