Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   M5T12_RS08105 Genome accession   NZ_CP103751
Coordinates   1667978..1668604 (+) Length   208 a.a.
NCBI ID   WP_023311030.1    Uniprot ID   A0A1Z3N2L7
Organism   Enterobacter asburiae strain 2497     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1662978..1673604
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M5T12_RS08085 (M5T12_08085) - 1663378..1665138 (-) 1761 WP_045354505.1 Lon protease family protein -
  M5T12_RS08090 (M5T12_08090) matP 1665325..1665777 (+) 453 WP_008499929.1 macrodomain Ter protein MatP -
  M5T12_RS08095 (M5T12_08095) ompA 1665841..1666896 (-) 1056 WP_023311028.1 porin OmpA -
  M5T12_RS08100 (M5T12_08100) sulA 1667251..1667760 (-) 510 WP_032668147.1 SOS-induced cell division inhibitor SulA -
  M5T12_RS08105 (M5T12_08105) sxy/tfoX 1667978..1668604 (+) 627 WP_023311030.1 TfoX/Sxy family DNA transformation protein Regulator
  M5T12_RS08110 (M5T12_08110) yccS 1668561..1670723 (-) 2163 WP_045354509.1 YccS family putative transporter -
  M5T12_RS08115 (M5T12_08115) - 1670743..1671189 (-) 447 WP_023311032.1 YccF domain-containing protein -
  M5T12_RS08120 (M5T12_08120) helD 1671313..1673367 (+) 2055 WP_045354511.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23906.46 Da        Isoelectric Point: 9.4588

>NTDB_id=724488 M5T12_RS08105 WP_023311030.1 1667978..1668604(+) (sxy/tfoX) [Enterobacter asburiae strain 2497]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=724488 M5T12_RS08105 WP_023311030.1 1667978..1668604(+) (sxy/tfoX) [Enterobacter asburiae strain 2497]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCCCCGTTGGGCGAGATTCATCATCGCGCGCT
GTTTGGAGGCTATACCCTGGCGGTGGATGATGCGGTTTTTGCCATGGTGTCAGACGGAGAGCTTTATCTTCGCGCCTGTG
AGGAGAGTGCGAAATACTGTGTAAAAAATGCCTCCTCTTTTTTAACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGATGGATTATGGCAGGACAGGGAGCGGTTGCTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
AAAAGAACGCTATCAGCGCCATCAACGAAACCGACTTAAGGATCTGCCAAACCTGACCTTTCAGCTTGAAGTCTTGCTCT
TTGAAGCTGGCATTACCAATGAGGAAACGCTGCGGGCGCTGGGTGCAAGAGCGAGCTGGCTAAAGATGCGGGCAAAAAAC
AAAGCGCTCAGTATTAAAGTTCTCTTCGCGCTGGAAGGGGCTATCGAGGGGCTGCATGAGGCGGCACTCCCGGCAGGCAT
TCGCCGGGAGCTAACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Z3N2L7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567