Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   KU43P_RS02070 Genome accession   NZ_AP019365
Coordinates   459702..460103 (+) Length   133 a.a.
NCBI ID   WP_317660837.1    Uniprot ID   A0A5K7TQ92
Organism   Pseudomonas sp. KU43P     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 454702..465103
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU43P_RS02045 (KU43P_04090) pyrR 455502..456020 (-) 519 WP_008099989.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  KU43P_RS02050 (KU43P_04100) ruvX 456071..456496 (-) 426 WP_110748630.1 Holliday junction resolvase RuvX -
  KU43P_RS02055 (KU43P_04110) - 456496..457065 (-) 570 WP_317660834.1 YqgE/AlgH family protein -
  KU43P_RS02060 (KU43P_04120) - 457439..458338 (-) 900 WP_317660835.1 energy transducer TonB -
  KU43P_RS02065 (KU43P_04130) gshB 458430..459383 (-) 954 WP_317660836.1 glutathione synthase -
  KU43P_RS02070 (KU43P_04140) pilG 459702..460103 (+) 402 WP_317660837.1 PleD family two-component system response regulator Regulator
  KU43P_RS02075 (KU43P_04150) pilH 460150..460515 (+) 366 WP_317660838.1 twitching motility response regulator PilH -
  KU43P_RS02080 (KU43P_04160) - 460512..461066 (+) 555 WP_317660839.1 chemotaxis protein CheW -
  KU43P_RS02085 (KU43P_04170) - 461114..463138 (+) 2025 WP_317663707.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14701.99 Da        Isoelectric Point: 6.0790

>NTDB_id=72421 KU43P_RS02070 WP_317660837.1 459702..460103(+) (pilG) [Pseudomonas sp. KU43P]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHQPQIIFVDVLMPRLDGYQTCAVIKHNSAYKDIP
VILLSSRDGLFDKARGRVVGSDQFLTKPFGKEELLDAIRAHVPGFVAQEQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=72421 KU43P_RS02070 WP_317660837.1 459702..460103(+) (pilG) [Pseudomonas sp. KU43P]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCACGCACGATCCGCCGCACCGCGCAGATGCTGCTCGGCGAAGC
GGGCTGCGAAGTGATCACCGCCAGTGACGGCTTCGATGCCCTGGCCAAGATCGTCGACCACCAGCCGCAGATCATTTTCG
TCGACGTGCTCATGCCGCGCCTGGACGGTTACCAGACCTGCGCGGTGATCAAGCACAACAGCGCCTACAAGGACATCCCG
GTGATTCTCCTGTCGTCACGCGATGGCCTGTTCGACAAGGCCCGCGGCCGGGTGGTCGGCTCCGACCAGTTCCTGACCAA
GCCCTTTGGCAAGGAAGAACTGCTCGACGCGATCAGGGCCCACGTGCCCGGTTTCGTCGCGCAGGAACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K7TQ92

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.672

91.729

0.639

Multiple sequence alignment