Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   M5R27_RS10470 Genome accession   NZ_CP103697
Coordinates   2140792..2141388 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain ST3576     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2135792..2146388
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M5R27_RS10455 (M5R27_10455) helD 2136000..2138054 (-) 2055 WP_032414747.1 DNA helicase IV -
  M5R27_RS10460 (M5R27_10460) - 2138179..2138625 (+) 447 WP_002898425.1 YccF domain-containing protein -
  M5R27_RS10465 (M5R27_10465) yccS 2138643..2140778 (+) 2136 WP_032414745.1 YccS family putative transporter -
  M5R27_RS10470 (M5R27_10470) sxy/tfoX 2140792..2141388 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  M5R27_RS10475 (M5R27_10475) sulA 2141737..2142246 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  M5R27_RS10480 (M5R27_10480) ompA 2142599..2143669 (+) 1071 WP_002898408.1 porin OmpA -
  M5R27_RS10485 (M5R27_10485) matP 2143801..2144253 (-) 453 WP_121915076.1 macrodomain Ter protein MatP -
  M5R27_RS10490 (M5R27_10490) - 2144439..2146196 (+) 1758 WP_032414743.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=724191 M5R27_RS10470 WP_004150836.1 2140792..2141388(-) (sxy/tfoX) [Klebsiella pneumoniae strain ST3576]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=724191 M5R27_RS10470 WP_004150836.1 2140792..2141388(-) (sxy/tfoX) [Klebsiella pneumoniae strain ST3576]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCTAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGTTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51