Detailed information NTG0724155

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: PXI10_RS07265
• Genome accession: NZ_CP118900
• Coordinates: 1370269..1371228 (+)
• Length: 319 a.a.
• NCBI ID: WP_070309048.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain BDS5
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1365269..1376228

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PXI10_RS07245 (PXI10_07245)	-	1365828..1367027 (-)	1200	WP_032591570.1	glycosyltransferase family 8 protein	-
PXI10_RS07250 (PXI10_07250)	-	1367020..1368171 (-)	1152	WP_032591573.1	glycosyltransferase family 8 protein	-
PXI10_RS07255 (PXI10_07255)	-	1368184..1369332 (-)	1149	WP_079344032.1	FkbM family methyltransferase	-
PXI10_RS07260 (PXI10_07260)	waaV	1369395..1370210 (-)	816	WP_060806422.1	glycosyltransferase family 2 protein	-
PXI10_RS07265 (PXI10_07265)	waaF	1370269..1371228 (+)	960	WP_070309048.1	lipopolysaccharide heptosyltransferase II	Regulator
PXI10_RS07270 (PXI10_07270)	gmhA	1371209..1371769 (-)	561	WP_020247045.1	D-sedoheptulose 7-phosphate isomerase	-
PXI10_RS07275 (PXI10_07275)	rfaE1	1371766..1373151 (-)	1386	WP_060806424.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
PXI10_RS07280 (PXI10_07280)	rfaD	1373144..1374097 (-)	954	WP_002859254.1	ADP-glyceromanno-heptose 6-epimerase	-
PXI10_RS07285 (PXI10_07285)	gmhB	1374098..1374659 (-)	562	Protein_1419	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
PXI10_RS07290 (PXI10_07290)	-	1374740..1375042 (+)	303	WP_002852762.1	cytochrome c	-
PXI10_RS07295 (PXI10_07295)	ccoS	1375065..1375271 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36789.44 Da
• Isoelectric Point: 10.4034

>NTDB_id=724155 PXI10_RS07265 WP_070309048.1 1370269..1371228(+) (waaF) [Campylobacter jejuni strain BDS5]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQVLSLRKKLGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLHIKAHLKDLKLPFKLKFQSLLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCDEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GSMHISAVYKVKTVAIFGPTKFTQTSPWQNENARWVHLNLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=724155 PXI10_RS07265 WP_070309048.1 1370269..1371228(+) (waaF) [Campylobacter jejuni strain BDS5]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTACAAACAAGTCCTATCTTTACGCAAAAAACTTGGCAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTCACATAAAAGCTCACCTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAGCCTTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGTCAAAGTCATGAAATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTCTGCGATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAACCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGTGATCTTTTCATCACAAATGACAGT
GGCTCTATGCACATAAGTGCGGTTTACAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACCTCACC
TTGGCAAAATGAAAATGCAAGATGGGTGCATTTAAATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	91.85	100	0.919