Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   M5S55_RS08245 Genome accession   NZ_CP103642
Coordinates   1743986..1744612 (+) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei strain 4453     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1738986..1749612
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M5S55_RS08225 (M5S55_08225) - 1739385..1741145 (-) 1761 WP_017384808.1 Lon protease family protein -
  M5S55_RS08230 (M5S55_08230) matP 1741332..1741784 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  M5S55_RS08235 (M5S55_08235) ompA 1741850..1742902 (-) 1053 WP_017694761.1 porin OmpA -
  M5S55_RS08240 (M5S55_08240) sulA 1743259..1743768 (-) 510 WP_026094322.1 SOS-induced cell division inhibitor SulA -
  M5S55_RS08245 (M5S55_08245) sxy/tfoX 1743986..1744612 (+) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  M5S55_RS08250 (M5S55_08250) yccS 1744569..1746731 (-) 2163 WP_015570895.1 YccS family putative transporter -
  M5S55_RS08255 (M5S55_08255) - 1746750..1747196 (-) 447 WP_003858149.1 YccF domain-containing protein -
  M5S55_RS08260 (M5S55_08260) helD 1747319..1749373 (+) 2055 WP_017384802.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=723876 M5S55_RS08245 WP_017384804.1 1743986..1744612(+) (sxy/tfoX) [Enterobacter hormaechei strain 4453]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=723876 M5S55_RS08245 WP_017384804.1 1743986..1744612(+) (sxy/tfoX) [Enterobacter hormaechei strain 4453]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACCCTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAATCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572