Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   PYH57_RS09945 Genome accession   NZ_CP118810
Coordinates   2006487..2007305 (-) Length   272 a.a.
NCBI ID   WP_250425877.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 7062     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2001487..2012305
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PYH57_RS09925 (PYH57_09915) - 2002580..2003557 (+) 978 WP_000379098.1 metal-dependent hydrolase -
  PYH57_RS09930 (PYH57_09920) - 2003818..2004654 (-) 837 WP_000886457.1 membrane protein -
  PYH57_RS09935 (PYH57_09925) - 2004663..2006180 (-) 1518 WP_000535832.1 ABC transporter ATP-binding protein -
  PYH57_RS09940 (PYH57_09930) - 2006195..2006509 (-) 315 WP_000435806.1 YfhH family protein -
  PYH57_RS09945 (PYH57_09935) recX 2006487..2007305 (-) 819 WP_250425877.1 recombination regulator RecX Regulator
  PYH57_RS09950 (PYH57_09940) sgtB 2007566..2008375 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  PYH57_RS09955 (PYH57_09945) - 2008633..2010149 (+) 1517 WP_250425889.1 IS3-like element ISSau2 family transposase -
  PYH57_RS09960 (PYH57_09950) - 2010318..2010833 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  PYH57_RS09965 (PYH57_09955) - 2010963..2011124 (-) 162 WP_001005407.1 SE1561 family protein -
  PYH57_RS09970 (PYH57_09960) - 2011471..2011551 (+) 81 WP_141667223.1 hypothetical protein -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32300.19 Da        Isoelectric Point: 6.3167

>NTDB_id=723761 PYH57_RS09945 WP_250425877.1 2006487..2007305(-) (recX) [Staphylococcus aureus strain 7062]
MPKITKIEVQKKNKERFNLFLDQQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIVLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=723761 PYH57_RS09945 WP_250425877.1 2006487..2007305(-) (recX) [Staphylococcus aureus strain 7062]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACCAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGTTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

98.897

100

0.989