Detailed information NTG0072373

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: GYH29_RS01850
• Genome accession: NZ_AP019312
• Coordinates: 406037..407182 (-)
• Length: 381 a.a.
• NCBI ID: WP_161523101.1
• Uniprot ID: -
• Organism: Chromobacterium haemolyticum strain CH06-BL
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 401037..412182

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GYH29_RS01830 (CH06BL_03560)	-	401509..403293 (+)	1785	WP_161523099.1	PglL family O-oligosaccharyltransferase	-
GYH29_RS01835 (CH06BL_03570)	rpoH	403369..404232 (-)	864	WP_161523100.1	RNA polymerase sigma factor RpoH	-
GYH29_RS01840 (CH06BL_03590)	ftsX	404418..405326 (-)	909	WP_019102028.1	permease-like cell division protein FtsX	-
GYH29_RS01845 (CH06BL_03600)	ftsE	405323..405976 (-)	654	WP_043592279.1	cell division ATP-binding protein FtsE	-
GYH29_RS01850 (CH06BL_03610)	pilA	406037..407182 (-)	1146	WP_161523101.1	signal recognition particle-docking protein FtsY	Machinery gene
GYH29_RS01855 (CH06BL_03620)	rsmD	407420..407977 (+)	558	WP_161523102.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
GYH29_RS01860 (CH06BL_03630)	-	408081..408332 (+)	252	WP_019100314.1	YfhL family 4Fe-4S dicluster ferredoxin	-
GYH29_RS01880 (CH06BL_03640)	tuf	408819..410009 (+)	1191	WP_081555062.1	elongation factor Tu	-
GYH29_RS01890 (CH06BL_03650)	secE	410166..410522 (+)	357	WP_019100014.1	preprotein translocase subunit SecE	-
GYH29_RS01895 (CH06BL_03660)	nusG	410522..411055 (+)	534	WP_043594671.1	transcription termination/antitermination protein NusG	-
GYH29_RS01900 (CH06BL_03670)	rplK	411155..411586 (+)	432	WP_019100246.1	50S ribosomal protein L11	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 40730.79 Da
• Isoelectric Point: 6.5182

>NTDB_id=72373 GYH29_RS01850 WP_161523101.1 406037..407182(-) (pilA) [Chromobacterium haemolyticum strain CH06-BL]
MFSFFKRKPQSEPTPPTTVQTEPAADAQTIIPPEVAAPAIQQPETRAPEQRHSTAAPAEAAPASTRADTPPEPPQVSLKK
MSWAERLKAGLSKTRDKLGKSLAGLFGGGKIDEELYEELETVLLTADMGVDATQHLLDDVRERVSLKGLKDASELKDALK
GSLSDLISPLEKPLDVSGKKPFVIMMAGVNGAGKTTSIGKLAKYYQSQGKSVLLAAGDTFRAAAREQLMAWGERNNVTVI
AQQGGDSAAVCYDAIQAAVARGIDIVLADTAGRLPTQLHLMEEIKKVKRVIQKALPDAPHEIILVLDANIGQNAITQVKT
FDDALGLTGLILSKLDGTAKGGVIAAIAKQRPVPLRFIGVGESIDDLRPFKTKDYIDALFD

Nucleotide

• Length: 1146 bp

>NTDB_id=72373 GYH29_RS01850 WP_161523101.1 406037..407182(-) (pilA) [Chromobacterium haemolyticum strain CH06-BL]
ATGTTTAGCTTCTTCAAAAGAAAACCCCAGTCCGAGCCCACGCCCCCGACAACAGTCCAAACGGAGCCTGCGGCCGACGC
TCAAACCATCATTCCGCCCGAAGTGGCCGCCCCTGCCATCCAACAACCGGAAACACGCGCGCCCGAGCAGCGTCACTCCA
CGGCAGCACCCGCCGAAGCCGCCCCAGCCTCGACGCGCGCCGACACGCCGCCCGAGCCCCCTCAGGTTTCTCTGAAAAAA
ATGAGCTGGGCGGAACGCCTGAAAGCCGGCCTGTCAAAAACCCGCGACAAGCTGGGGAAATCCCTGGCTGGTCTGTTTGG
CGGCGGCAAGATCGACGAAGAGTTGTACGAGGAACTGGAAACCGTTCTGCTCACAGCCGACATGGGGGTGGACGCCACAC
AGCACCTGCTCGACGACGTGCGCGAGCGTGTTTCGCTGAAAGGGCTGAAGGATGCTTCTGAACTGAAAGACGCATTGAAA
GGGTCGCTCAGCGATTTGATCTCGCCACTGGAAAAACCGCTGGACGTTAGCGGCAAGAAACCCTTCGTCATCATGATGGC
CGGCGTCAACGGCGCCGGCAAGACTACTTCGATAGGCAAGCTGGCCAAGTACTATCAAAGCCAGGGCAAGAGCGTGCTGC
TGGCTGCCGGCGACACCTTCCGCGCCGCGGCGCGCGAACAGCTGATGGCCTGGGGCGAGCGCAACAACGTCACCGTAATC
GCCCAGCAAGGGGGCGACTCCGCCGCCGTTTGCTACGACGCGATTCAAGCCGCGGTCGCCCGCGGCATCGACATCGTGCT
GGCAGACACCGCTGGCCGCCTGCCCACCCAACTGCACCTCATGGAAGAGATCAAGAAGGTAAAGCGGGTAATCCAAAAGG
CTTTGCCGGACGCGCCGCATGAAATCATCCTGGTTCTGGACGCCAATATCGGCCAGAACGCCATCACTCAGGTCAAGACT
TTTGACGACGCCCTCGGCCTGACCGGGCTAATCTTGAGCAAGCTGGACGGCACCGCCAAGGGCGGCGTAATCGCGGCCAT
CGCCAAACAACGCCCCGTTCCGCTGCGCTTTATCGGTGTAGGCGAAAGCATAGACGACCTGCGGCCGTTCAAGACCAAGG
ACTACATCGACGCGCTGTTCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (96-163)

• SRP54-type protein, GTPase domain (SRP54) (181-380)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	61.631	100	0.675