Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   PWP91_RS10495 Genome accession   NZ_CP118738
Coordinates   2103010..2103681 (-) Length   223 a.a.
NCBI ID   WP_003132782.1    Uniprot ID   Q9CET7
Organism   Lactococcus lactis strain P-1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2098010..2108681
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PWP91_RS10470 (PWP91_10470) pheA 2098315..2099154 (-) 840 WP_014570689.1 prephenate dehydratase -
  PWP91_RS10475 (PWP91_10475) - 2099156..2099644 (-) 489 WP_017864896.1 shikimate kinase -
  PWP91_RS10480 (PWP91_10480) aroA 2099668..2100960 (-) 1293 WP_058203552.1 3-phosphoshikimate 1-carboxyvinyltransferase -
  PWP91_RS10485 (PWP91_10485) - 2101081..2102145 (-) 1065 WP_010906116.1 prephenate dehydrogenase -
  PWP91_RS10490 (PWP91_10490) - 2102148..2103023 (-) 876 WP_058203550.1 sensor histidine kinase -
  PWP91_RS10495 (PWP91_10495) braR 2103010..2103681 (-) 672 WP_003132782.1 response regulator transcription factor Regulator
  PWP91_RS10500 (PWP91_10500) - 2103684..2104748 (-) 1065 WP_274998501.1 VanZ family protein -
  PWP91_RS10505 (PWP91_10505) - 2104929..2106932 (-) 2004 WP_033899972.1 ABC transporter permease -
  PWP91_RS10510 (PWP91_10510) - 2106925..2107704 (-) 780 WP_012898329.1 ABC transporter ATP-binding protein -
  PWP91_RS10515 (PWP91_10515) - 2107893..2108252 (-) 360 WP_010906119.1 YxeA family protein -

Sequence

Protein


Download         Length: 223 a.a.        Molecular weight: 25510.44 Da        Isoelectric Point: 4.8093

>NTDB_id=723569 PWP91_RS10495 WP_003132782.1 2103010..2103681(-) (braR) [Lactococcus lactis strain P-1]
MTKIFIVEDDEIIVKAIKIALEKEFQVRSVSNFRAVKQEIMEFEADLVLMDIGLPFYSGFYWTNELRKLSQIPIIFISSA
SDDMNQVTAMNQGADDFVTKPFSLEILNAKIKALLRRSYSFSGIEKLEFAGYVLSENTLISTQEGEREEIELTSSENKIL
TLLFRGNGEVVTKEKILQELWQTDEFIDANTLNVKMTRLRKKLGEIGFDKHIMTKRGSGYALV

Nucleotide


Download         Length: 672 bp        

>NTDB_id=723569 PWP91_RS10495 WP_003132782.1 2103010..2103681(-) (braR) [Lactococcus lactis strain P-1]
ATGACTAAAATATTTATTGTAGAAGATGATGAAATTATTGTCAAAGCAATTAAGATTGCCTTAGAAAAAGAATTTCAAGT
CAGAAGTGTTTCCAATTTTCGAGCAGTAAAACAAGAAATTATGGAATTTGAAGCAGATTTAGTATTAATGGATATTGGGC
TACCATTTTATAGTGGTTTTTATTGGACAAATGAATTAAGAAAGCTTTCCCAAATTCCTATTATCTTTATTTCTTCGGCA
TCGGATGACATGAATCAAGTAACCGCTATGAATCAAGGAGCTGATGATTTTGTAACCAAGCCATTTTCATTAGAAATTTT
AAATGCAAAAATAAAAGCTTTACTGCGCAGAAGTTATTCTTTTTCAGGGATTGAAAAGTTAGAATTTGCTGGTTATGTTT
TATCTGAAAATACTTTGATTTCAACTCAAGAAGGTGAACGCGAAGAAATTGAGCTAACAAGTTCTGAAAATAAAATTTTA
ACTCTTCTTTTTCGTGGAAATGGTGAAGTGGTGACCAAGGAAAAAATTCTACAAGAGTTGTGGCAAACAGATGAATTTAT
TGATGCAAATACTTTAAATGTAAAAATGACTCGTTTACGCAAAAAACTTGGTGAAATTGGCTTTGATAAGCATATTATGA
CAAAAAGAGGAAGTGGTTATGCTCTGGTTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-222)

Response regulator receiver domain (Response_reg)

(4-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9CET7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.441

99.552

0.413