Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   PWP91_RS05515 Genome accession   NZ_CP118738
Coordinates   1077696..1079363 (+) Length   555 a.a.
NCBI ID   WP_017864362.1    Uniprot ID   -
Organism   Lactococcus lactis strain P-1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1072696..1084363
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PWP91_RS05490 (PWP91_05490) - 1073753..1073992 (+) 240 WP_003131346.1 exodeoxyribonuclease VII small subunit -
  PWP91_RS05495 (PWP91_05495) - 1074141..1075298 (+) 1158 WP_033899223.1 glycerate kinase -
  PWP91_RS05500 (PWP91_05500) - 1075380..1076237 (+) 858 WP_012897509.1 polyprenyl synthetase family protein -
  PWP91_RS05505 (PWP91_05505) - 1076316..1077122 (+) 807 WP_015426159.1 TlyA family RNA methyltransferase -
  PWP91_RS05510 (PWP91_05510) - 1077119..1077565 (+) 447 WP_015426160.1 arginine repressor -
  PWP91_RS05515 (PWP91_05515) recN 1077696..1079363 (+) 1668 WP_017864362.1 DNA repair protein RecN Machinery gene
  PWP91_RS05520 (PWP91_05520) - 1080088..1080654 (+) 567 WP_003131353.1 TMEM175 family protein -
  PWP91_RS05525 (PWP91_05525) - 1080752..1081273 (+) 522 WP_003131354.1 DUF805 domain-containing protein -
  PWP91_RS05530 (PWP91_05530) - 1081297..1082235 (+) 939 WP_274998924.1 DUF805 domain-containing protein -
  PWP91_RS05535 (PWP91_05535) rsmH 1082455..1083408 (+) 954 WP_010905597.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  PWP91_RS05540 (PWP91_05540) ftsL2 1083566..1083946 (+) 381 WP_003131357.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 555 a.a.        Molecular weight: 62810.02 Da        Isoelectric Point: 4.6475

>NTDB_id=723543 PWP91_RS05515 WP_017864362.1 1077696..1079363(+) (recN) [Lactococcus lactis strain P-1]
MLQEISIKNFAIIEEIHLSFESGMTILTGETGAGKSIIIDAMSLLLGGRASSDFVRHGANKAEIEGLFFFDKTPELKAVL
LELGFEEVDSEIILRREIFANGRSVCRINGQMVNLATLRQVGELLVDIHGQHDSQELMNPKSHLRLLDEFGDEAFDQIKN
NYKLKFENFKNLRQQLNLRQKNEQEFAQRIEILQFQAEEIEAAEINLEEDEQLINRREKLNNIKNIADSLSSAYLALDDE
DNDYSSLNNIRTTMTELDKISNFDNDYQELADKTAESYYVLEEVANQIQRIMSDLEFNPAELLQIEDRIMTLTTLKKKYG
PELSDVMNYLEKVQLELSELTGSENDSENLENSVKVAQVQLIEASKKLNEARHKIAKEVEKDIKHELSELYMEKADFKVS
FEGAKFSANGNEHVEFFIQTNPGEGFKPLAKTASGGELSRLMLAIKSSFSRRENKTAIVFDEVDTGVSGRVAQAIANKIY
KIARHGQVLAISHLPQVVAIADRQFYIEKASTDDITTSTVRKLNAEERVNEIAKMLAGEDLTKEALAQAKRLLSK

Nucleotide


Download         Length: 1668 bp        

>NTDB_id=723543 PWP91_RS05515 WP_017864362.1 1077696..1079363(+) (recN) [Lactococcus lactis strain P-1]
ATGTTACAAGAGATTTCAATCAAAAATTTTGCAATTATTGAAGAAATTCATCTATCCTTTGAGAGTGGAATGACGATTTT
AACTGGGGAAACTGGTGCGGGAAAATCAATAATTATTGATGCAATGTCTTTATTATTAGGTGGGCGTGCTTCGAGTGATT
TTGTGCGGCATGGGGCAAACAAAGCCGAAATAGAAGGTCTCTTTTTCTTTGATAAAACTCCAGAATTGAAGGCGGTATTA
TTAGAACTTGGCTTTGAAGAAGTAGATTCTGAAATTATTTTAAGACGTGAGATTTTTGCTAATGGTCGTTCCGTTTGTCG
AATCAATGGTCAAATGGTTAATTTAGCTACGCTAAGACAAGTGGGTGAATTATTAGTTGATATTCATGGTCAACACGATA
GCCAAGAATTGATGAATCCGAAAAGCCATCTTCGTTTACTTGATGAATTTGGTGACGAAGCCTTTGATCAGATAAAAAAT
AATTACAAACTCAAATTTGAAAACTTCAAAAATTTGCGTCAACAGCTCAATTTACGACAAAAAAATGAGCAAGAATTTGC
TCAAAGAATTGAAATTCTTCAATTTCAGGCTGAAGAAATTGAAGCAGCGGAAATTAATCTTGAAGAAGATGAACAATTAA
TTAATCGCCGAGAAAAGTTAAATAATATTAAAAATATTGCTGATTCGCTTAGTAGTGCTTATCTAGCGCTTGATGATGAA
GATAATGATTATTCAAGTCTTAATAATATCCGAACAACAATGACAGAATTGGATAAAATTAGTAACTTTGATAATGACTA
CCAAGAGCTTGCTGACAAGACAGCTGAAAGTTATTATGTATTAGAAGAAGTTGCTAATCAAATTCAAAGAATCATGAGTG
ATTTAGAATTTAATCCAGCTGAACTTTTACAAATTGAAGACCGGATTATGACCTTGACCACTTTGAAGAAAAAATATGGC
CCAGAACTGTCCGATGTGATGAACTATTTAGAGAAAGTCCAACTTGAACTCTCAGAACTGACGGGTTCAGAAAATGACTC
AGAAAATCTAGAAAATTCAGTTAAAGTTGCACAAGTTCAACTCATTGAAGCAAGTAAAAAACTTAATGAAGCGCGCCATA
AAATTGCCAAAGAAGTTGAAAAAGATATTAAACACGAACTTTCTGAGCTTTATATGGAAAAAGCTGATTTCAAAGTTAGT
TTTGAAGGGGCAAAATTTTCAGCAAACGGGAATGAGCATGTTGAATTCTTTATTCAAACCAATCCGGGAGAAGGATTTAA
ACCGCTGGCAAAAACAGCTTCGGGTGGTGAACTTTCACGTTTAATGCTCGCTATAAAATCAAGCTTTTCAAGACGTGAAA
ATAAAACAGCCATTGTTTTTGATGAGGTCGATACTGGTGTTTCTGGCCGTGTTGCTCAAGCGATTGCTAATAAAATATAT
AAAATTGCTAGACATGGGCAAGTTCTTGCAATTTCTCACCTTCCGCAAGTTGTGGCCATTGCCGACAGACAATTTTATAT
TGAAAAAGCTTCAACCGATGACATTACTACTTCCACAGTTAGAAAATTAAACGCTGAAGAAAGAGTAAATGAAATTGCGA
AAATGCTTGCTGGTGAAGATTTAACTAAAGAAGCCTTAGCTCAGGCTAAACGTTTATTGAGCAAATAA

Domains

Predicted by InterProScan.

AAA domain (AAA_23)

(4-225)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

43.182

100

0.445