Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   EKM74_RS03510 Genome accession   NZ_AP019306
Coordinates   639181..640224 (-) Length   347 a.a.
NCBI ID   WP_125571277.1    Uniprot ID   -
Organism   Staphylococcus aureus strain TUM9463     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 634181..645224
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EKM74_RS03480 - 634602..635858 (-) 1257 WP_125571275.1 aminopeptidase -
  EKM74_RS03485 - 635861..636061 (-) 201 WP_000180460.1 DUF1128 family protein -
  EKM74_RS03490 - 636208..636672 (+) 465 WP_042109418.1 low molecular weight protein-tyrosine-phosphatase -
  EKM74_RS03495 - 636679..636954 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  EKM74_RS03500 - 637232..638449 (+) 1218 WP_000037075.1 YihY/virulence factor BrkB family protein -
  EKM74_RS03505 vraR 638562..639191 (-) 630 WP_042109421.1 two-component system response regulator VraR Regulator
  EKM74_RS03510 vraS 639181..640224 (-) 1044 WP_125571277.1 sensor histidine kinase Regulator
  EKM74_RS03515 liaF 640221..640922 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  EKM74_RS03520 - 640937..641323 (-) 387 WP_001110179.1 hypothetical protein -
  EKM74_RS03525 map 641540..642298 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  EKM74_RS03535 - 642829..643815 (+) 987 WP_000999717.1 FUSC family protein -
  EKM74_RS03545 - 644246..644659 (-) 414 WP_001557448.1 hypothetical protein -
  EKM74_RS03550 - 644688..644798 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40026.49 Da        Isoelectric Point: 6.0577

>NTDB_id=72302 EKM74_RS03510 WP_125571277.1 639181..640224(-) (vraS) [Staphylococcus aureus strain TUM9463]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPIKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=72302 EKM74_RS03510 WP_125571277.1 639181..640224(-) (vraS) [Staphylococcus aureus strain TUM9463]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTATTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCATACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCTCGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATAAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGATAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

99.712

100

0.997


Multiple sequence alignment