NTDB

Overview

Name	spo0J	Type	Regulator
Locus tag	K5602_RS01690	Genome accession	NZ_AP024315
Coordinates	386204..387049 (+)	Length	281 a.a.
NCBI ID	WP_001825659.1	Uniprot ID	-
Organism	Staphylococcus aureus strain BDH17
Function	require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 381204..392049

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K5602_RS01675 (BDH17TP_03300)	-	381470..383311 (-)	1842	WP_000077324.1	bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase	-
K5602_RS01680 (BDH17TP_03310)	metC	383280..384440 (-)	1161	WP_000175863.1	cystathionine beta-lyase MetC	-
K5602_RS01685 (BDH17TP_03320)	-	384437..385540 (-)	1104	WP_000655690.1	PLP-dependent transferase	-
K5602_RS01690 (BDH17TP_03330)	spo0J	386204..387049 (+)	846	WP_001825659.1	ParB/RepB/Spo0J family partition protein	Regulator
K5602_RS01695 (BDH17TP_03340)	-	387203..388084 (+)	882	WP_000373073.1	mechanosensitive ion channel family protein	-
K5602_RS01700 (BDH17TP_03350)	-	388114..388317 (+)	204	WP_000157348.1	DUF951 domain-containing protein	-
K5602_RS01705 (BDH17TP_03360)	ychF	388329..389426 (+)	1098	WP_001218732.1	redox-regulated ATPase YchF	-
K5602_RS01710 (BDH17TP_03370)	-	389512..389703 (-)	192	WP_001052481.1	hypothetical protein	-
K5602_RS01715 (BDH17TP_03380)	rpsF	389947..390243 (+)	297	WP_001261460.1	30S ribosomal protein S6	-
K5602_RS01720 (BDH17TP_03390)	ssbA	390264..390767 (+)	504	WP_000934799.1	single-stranded DNA-binding protein	Machinery gene
K5602_RS01725 (BDH17TP_03400)	rpsR	390819..391061 (+)	243	WP_000897044.1	30S ribosomal protein S18	-
K5602_RS13995	-	391298..391525 (-)	228	Protein_346	Abi family protein	-
K5602_RS13830	-	391518..391794 (-)	277	Protein_347	site-specific integrase	-

Sequence

Protein

Download Length: 281 a.a. Molecular weight: 32797.86 Da Isoelectric Point: 10.0554

                                >NTDB_id=72298 K5602_RS01690 WP_001825659.1 386204..387049(+) (spo0J) [Staphylococcus aureus strain BDH17]

MSELSKSEDQRITKTKDEQIKKIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA

SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK

KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR

EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide

Download Length: 846 bp

                                >NTDB_id=72298 K5602_RS01690 WP_001825659.1 386204..387049(+) (spo0J) [Staphylococcus aureus strain BDH17]

GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGAAAATAGATATATCGGA

TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT

ATGGTATTTTGCAACCAATTGTGCTAAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT

TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT

CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA

CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA

AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA

AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA

ATGTTTCGTCAAAGTCGGAAACAGACAAGGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA

GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCACAAGATGA

CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
spo0J	Streptococcus mutans UA159	40.996	92.883	0.381

Detailed information NTG0072298