Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   NX050_RS20050 Genome accession   NZ_CP103456
Coordinates   3733313..3733453 (-) Length   46 a.a.
NCBI ID   WP_225910706.1    Uniprot ID   -
Organism   Bacillus subtilis strain PN176 (HK176)     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 3728313..3738453
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX050_RS20045 (NX050_20045) - 3732195..3733367 (-) 1173 Protein_3937 condensation domain-containing protein -
  NX050_RS20050 (NX050_20050) comS 3733313..3733453 (-) 141 WP_225910706.1 competence protein ComS Regulator
  NX050_RS20055 (NX050_20055) srfAB 3733545..3736589 (-) 3045 Protein_3939 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5260.11 Da        Isoelectric Point: 8.7633

>NTDB_id=722914 NX050_RS20050 WP_225910706.1 3733313..3733453(-) (comS) [Bacillus subtilis strain PN176 (HK176)]
MNRSGKHLISCIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=722914 NX050_RS20050 WP_225910706.1 3733313..3733453(-) (comS) [Bacillus subtilis strain PN176 (HK176)]
TTGAACCGATCAGGCAAGCATCTTATCAGCTGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains


Predicted by InterproScan.

(1-44)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978