Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NX050_RS17405 Genome accession   NZ_CP103456
Coordinates   3214390..3215184 (-) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis strain PN176 (HK176)     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3209390..3220184
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX050_RS17370 (NX050_17370) ephM 3210233..3211093 (-) 861 WP_014479220.1 epoxide hydrolase EphM -
  NX050_RS17375 (NX050_17375) spdL 3211080..3211412 (-) 333 WP_014479219.1 SdpC immunity protein SpdL -
  NX050_RS17380 (NX050_17380) yfhK 3211497..3212015 (-) 519 WP_014479218.1 SH3 domain-containing protein -
  NX050_RS17385 (NX050_17385) yfhJ 3212160..3212429 (-) 270 WP_003243789.1 YfhJ family protein -
  NX050_RS17390 (NX050_17390) sspK 3212554..3212706 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  NX050_RS17395 (NX050_17395) yfhI 3212738..3213931 (-) 1194 WP_003243500.1 MFS transporter -
  NX050_RS17400 (NX050_17400) yfhH 3214074..3214388 (-) 315 WP_003244592.1 YfhH family protein -
  NX050_RS17405 (NX050_17405) recX 3214390..3215184 (-) 795 WP_014479217.1 recombination regulator RecX Regulator
  NX050_RS17410 (NX050_17410) yfhF 3215273..3216184 (+) 912 WP_014479216.1 TIGR01777 family oxidoreductase -
  NX050_RS17415 (NX050_17415) yfhE 3216239..3216349 (+) 111 WP_003223230.1 YfhE family protein -
  NX050_RS17420 (NX050_17420) yfhD 3216415..3216606 (+) 192 WP_014479215.1 YfhD family protein -
  NX050_RS17425 (NX050_17425) yfhC 3216645..3217229 (-) 585 WP_033881364.1 nitroreductase -
  NX050_RS17430 (NX050_17430) yfhB 3217317..3218198 (-) 882 WP_014479213.1 PhzF family phenazine biosynthesis isomerase -
  NX050_RS17435 (NX050_17435) sxzA 3218313..3219344 (-) 1032 WP_003233568.1 iron chelate uptake ABC transporter family permease subunit -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=722909 NX050_RS17405 WP_014479217.1 3214390..3215184(-) (recX) [Bacillus subtilis strain PN176 (HK176)]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=722909 NX050_RS17405 WP_014479217.1 3214390..3215184(-) (recX) [Bacillus subtilis strain PN176 (HK176)]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992