Detailed information NTG0722902

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: NX050_RS15820
• Genome accession: NZ_CP103456
• Coordinates: 2922997..2923950 (-)
• Length: 317 a.a.
• NCBI ID: WP_014479436.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain PN176 (HK176)
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 2917997..2928950

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NX050_RS15790 (NX050_15790)	appD	2918128..2919114 (-)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-
NX050_RS15795 (NX050_15795)	yjaZ	2919306..2920091 (-)	786	WP_014479439.1	DUF2268 domain-containing protein	-
NX050_RS15800 (NX050_15800)	fabF	2920167..2921408 (-)	1242	WP_014479438.1	beta-ketoacyl-ACP synthase II	-
NX050_RS15805 (NX050_15805)	fabH	2921431..2922369 (-)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
NX050_RS15810 (NX050_15810)	yjzB	2922534..2922761 (+)	228	WP_031600361.1	spore coat protein YjzB	-
NX050_RS15815 (NX050_15815)	comZ	2922791..2922982 (-)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
NX050_RS15820 (NX050_15820)	med	2922997..2923950 (-)	954	WP_014479436.1	transcriptional regulator Med	Regulator
NX050_RS15825 (NX050_15825)	-	2924041..2924598 (-)	558	WP_014479435.1	hypothetical protein	-
NX050_RS15830 (NX050_15830)	-	2924680..2925414 (-)	735	WP_014479433.1	hypothetical protein	-
NX050_RS15835 (NX050_15835)	yjzD	2925663..2925848 (+)	186	WP_003245236.1	YjzD family protein	-
NX050_RS15840 (NX050_15840)	yjzC	2925894..2926073 (-)	180	WP_003245356.1	YjzC family protein	-
NX050_RS15845 (NX050_15845)	-	2926251..2927401 (+)	1151	WP_087614160.1	IS3 family transposase	-
NX050_RS15850 (NX050_15850)	argF	2927449..2928408 (-)	960	WP_014479432.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.88 Da
• Isoelectric Point: 4.6652

>NTDB_id=722902 NX050_RS15820 WP_014479436.1 2922997..2923950(-) (med) [Bacillus subtilis strain PN176 (HK176)]
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=722902 NX050_RS15820 WP_014479436.1 2922997..2923950(-) (med) [Bacillus subtilis strain PN176 (HK176)]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTCCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.369	100	0.994