Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NX050_RS14180 Genome accession   NZ_CP103456
Coordinates   2636178..2636642 (+) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain PN176 (HK176)     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2631178..2641642
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX050_RS14160 (NX050_14160) fadH 2632366..2633130 (-) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -
  NX050_RS14165 (NX050_14165) ppeE 2633273..2634133 (+) 861 WP_003232400.1 metallophosphoesterase -
  NX050_RS14170 (NX050_14170) ltdD 2634190..2634684 (+) 495 WP_072174092.1 L,D-transpeptidase family protein -
  NX050_RS14175 (NX050_14175) ykuC 2634760..2636052 (+) 1293 WP_014479656.1 MFS transporter -
  NX050_RS14180 (NX050_14180) kre 2636178..2636642 (+) 465 WP_003232406.1 YkyB family protein Regulator
  NX050_RS14185 (NX050_14185) cheV 2636686..2637597 (-) 912 WP_014476655.1 chemotaxis protein CheV -
  NX050_RS14190 (NX050_14190) - 2637801..2637962 (+) 162 WP_003245246.1 hypothetical protein -
  NX050_RS14195 (NX050_14195) dapX 2638164..2639345 (+) 1182 WP_014479654.1 aminotransferase A -
  NX050_RS14200 (NX050_14200) kinA 2639342..2641171 (-) 1830 WP_014479653.1 sporulation histidine kinase KinA -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=722893 NX050_RS14180 WP_003232406.1 2636178..2636642(+) (kre) [Bacillus subtilis strain PN176 (HK176)]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=722893 NX050_RS14180 WP_003232406.1 2636178..2636642(+) (kre) [Bacillus subtilis strain PN176 (HK176)]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1