Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PXH81_RS04715 Genome accession   NZ_CP118539
Coordinates   1092013..1092429 (+) Length   138 a.a.
NCBI ID   WP_004085459.1    Uniprot ID   B2I4N3
Organism   Xylella fastidiosa strain ICMP 15197     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1087013..1097429
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PXH81_RS04700 (PXH81_04700) - 1088812..1089621 (-) 810 WP_011097814.1 DUF6216 family protein -
  PXH81_RS04705 (PXH81_04705) - 1089936..1090811 (-) 876 WP_012382557.1 energy transducer TonB -
  PXH81_RS04710 (PXH81_04710) gshB 1090813..1091757 (-) 945 WP_004572847.1 glutathione synthase -
  PXH81_RS04715 (PXH81_04715) pilG 1092013..1092429 (+) 417 WP_004085459.1 PleD family two-component system response regulator Regulator
  PXH81_RS04720 (PXH81_04720) - 1092446..1092976 (+) 531 WP_004085458.1 chemotaxis protein CheW -
  PXH81_RS04725 (PXH81_04725) - 1093016..1095058 (+) 2043 WP_004572848.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 138 a.a.        Molecular weight: 15325.02 Da        Isoelectric Point: 9.7976

>NTDB_id=722643 PXH81_RS04715 WP_004085459.1 1092013..1092429(+) (pilG) [Xylella fastidiosa strain ICMP 15197]
MIKSVASGKELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTAIDGFEALAKIADQKSQIIFVDIMMPRLDGYQTCALIK
NNNLFKSTPVIMLSSKDGLFDKARGRVVGSEQYLTKPFTREELLSAIRTYVNPLKLAV

Nucleotide


Download         Length: 417 bp        

>NTDB_id=722643 PXH81_RS04715 WP_004085459.1 1092013..1092429(+) (pilG) [Xylella fastidiosa strain ICMP 15197]
ATGATTAAAAGTGTTGCTAGCGGCAAGGAACTCGCAGGTCTTAGGGTGATGGTCATTGATGACTCAAAAACCATAAGACG
TACCGCTGAAACGCTTCTTAAGCGTGAAGGGTGTGAGGTGGTTACCGCTATTGATGGCTTTGAAGCCTTAGCGAAAATTG
CTGATCAGAAGTCGCAGATTATTTTTGTCGATATTATGATGCCGCGCTTGGATGGTTATCAAACTTGCGCGTTGATAAAA
AACAATAACTTGTTTAAGTCGACTCCAGTGATCATGCTTTCTTCTAAAGATGGCTTATTCGATAAGGCGCGCGGTCGTGT
GGTTGGTTCCGAACAATATCTGACCAAACCTTTTACACGCGAGGAGTTGTTAAGTGCCATCCGTACATATGTTAATCCTT
TAAAATTAGCTGTTTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB B2I4N3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.77

88.406

0.652