Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | EKM72_RS01075 | Genome accession | NZ_AP019305 |
| Coordinates | 215573..215872 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844410.1 | Uniprot ID | A0A7R6NZL1 |
| Organism | Staphylococcus aureus strain TUM9458 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 210573..220872
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EKM72_RS01050 | gcvPA | 211785..213131 (-) | 1347 | WP_000019691.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| EKM72_RS01055 | gcvT | 213151..214242 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| EKM72_RS01060 | - | 214401..214925 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| EKM72_RS01065 | - | 214915..215061 (-) | 147 | WP_001792109.1 | hypothetical protein | - |
| EKM72_RS01070 | comGF | 215158..215655 (-) | 498 | WP_001788897.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| EKM72_RS01075 | comGE | 215573..215872 (-) | 300 | WP_000844410.1 | hypothetical protein | Machinery gene |
| EKM72_RS01080 | comGD | 215859..216305 (-) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| EKM72_RS01085 | comGC | 216283..216594 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| EKM72_RS01090 | comGB | 216608..217678 (-) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| EKM72_RS01095 | comGA | 217650..218624 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| EKM72_RS01100 | - | 218676..219299 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| EKM72_RS01105 | - | 219296..219625 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| EKM72_RS01110 | - | 219625..220611 (-) | 987 | WP_000161311.1 | ROK family glucokinase | - |
| EKM72_RS01115 | - | 220608..220811 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11079.18 Da Isoelectric Point: 9.9215
>NTDB_id=72245 EKM72_RS01075 WP_000844410.1 215573..215872(-) (comGE) [Staphylococcus aureus strain TUM9458]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQSIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQSIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=72245 EKM72_RS01075 WP_000844410.1 215573..215872(-) (comGE) [Staphylococcus aureus strain TUM9458]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAATCAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAATCAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus N315 |
100 |
100 |
1 |
| comGE | Staphylococcus aureus MW2 |
85.965 |
100 |
0.99 |